CB304491

Overview
NameCB304491
Unique NameCB304491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:476..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 2.939e-24
Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = -1
Query:  313 EAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 528
            EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  138 EAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.838e-24
Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = -1
Query:  313 EAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 528
            EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  137 EAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.013e-24
Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = -1
Query:  313 NEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 531
            NE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI +RPAW+K +
Sbjct:  136 NEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 3.249e-23
Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = -1
Query:  301 NEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 531
            NEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I +RP+W K LAL K
Sbjct:  138 NEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.235e-22
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = -1
Query:  301 NEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 531
            +E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  136 SEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.592e-22
Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = -1
Query:  301 NEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 531
            +EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  136 SEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21
Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = -1
Query:  301 EAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 528
            E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I++RPAWAKV+ L K
Sbjct:  187 EGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.972e-21
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = -1
Query:  313 EAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 528
            EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KVL
Sbjct:  141 EAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 8.848e-21
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = -1
Query:  316 EAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 528
            EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KV
Sbjct:  141 EAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CB304491 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.048e-13
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = -1
Query:  304 KLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 522
            KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:  142 KLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
The following BLAST results are available for this feature:
BLAST of CB304491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GST11_ARATH2.939e-2476.39Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_ARATH3.838e-2476.39Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF_HYOMU5.013e-2468.49Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF_SILCU3.249e-2369.23Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC1.235e-2262.34Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_TOBAC3.592e-2261.04Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF6_ARATH1.365e-2165.79Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GST16_ARATH3.972e-2168.06Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH8.848e-2167.61Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF1_ORYSJ3.048e-1349.32Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_E07 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_E07 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304491 ID=CB304491; Name=CB304491; organism=Citrus sinensis; type=EST; length=531bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAGAATATCTCCAGCTT
CGTTTTATTAGGGTACATAGATAAAATAAAAACCTCAAGCCATCAACATC
AAAGTTGAATATGAGGCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAA
CTACAAAGCATCAATATTCTGCAGAATATTGATGACAAACGCCAAACAAG
AGAATACGAACTCGAAAACCAGCCTAATAGGTATTACAAAAGATAAGTGA
CCACCGAGGAGCGACTAACGTCTAGTAGGTGGCGGGCAGAGTGTTCAGTG
TTTGAGCAAGGCAAGGACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAG
CTGCCCATGCGCTAACATGGGGGCGTGCATCAAACAGCTTCTTGACAGGC
GTCCCCAACAACAAATTAATATTGGGGAGATGATGCAAATCGACCAAGGT
GAAGCTGTCGCACGCCAAGTATTTGGACTGGGACAAACGGGCCTCGTAAA
CATCTAAAATTTTGGCAAGCTTAGCTTCATT
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