CB304496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.386e-46 Identity = 81/111 (72.97%), Postives = 102/111 (91.89%), Query Frame = -1 Query: 258 NEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLSEYR 590 NE LKKTFACYLSTTTGPVAGT+YLS ARVAFCSDRPL FTAPSGQE+WSYY+V++PLAN+++VNPV VKE +KY+++ TV+GH+FWFMGFV++EKAT+HLL S+S+++ Sbjct: 154 NETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQ 264
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.210e-27 Identity = 54/110 (49.09%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 261 NEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLSEY 590 +EKL KT+ACYLST+ GPV G +YLST ++AF SD PL + Q WSYYKV++P + +VNP T + N SDKY+++++++ HEFWFMGFV++E A L ++ + Sbjct: 149 DEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGE-QTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAVQSH 257
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.639e-26 Identity = 52/106 (49.06%), Postives = 77/106 (72.64%), Query Frame = -1 Query: 270 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSL 587 E+L +FACYLST+ GPV G LY+S+A++A+CSD PL + Q WSYYKV+IPL + +VNP N ++KY+++++V+ HEFWFMGF++++ A L +SL Sbjct: 187 EQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKN-GDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.136e-24 Identity = 52/107 (48.60%), Postives = 74/107 (69.16%), Query Frame = -1 Query: 267 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLS 587 EKL K + CYLSTT GP+AG L++S+ ++AFCS+R + +P G+ +YKV IPL I+ VN S KY+++VTV+G +FWFMGF+S++KA N L +LS Sbjct: 108 EKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.758e-24 Identity = 51/108 (47.22%), Postives = 75/108 (69.44%), Query Frame = -1 Query: 264 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLSE 587 EKL K + CYLSTT G +AG L++S+ ++AFCS+R + T+P G +YKV IPL I+ VN + S +Y+++VTV+ ++FWFMGFVS++KA N L +L+E Sbjct: 100 EKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNE 207
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 8.116e-24 Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = -1 Query: 267 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLS 587 EKL K + CYLSTT GP+AG L++S+ ++AFCS+R + +P G + +YKV IPL I+ VN + S KY++IVT++ +FWFMGFVS++KA N L +L+ Sbjct: 108 EKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALN 214
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.116e-24 Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = -1 Query: 267 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLS 587 EKL K + CYLSTT GP+AG L++S+ ++AFCS+R + +P G +YKV IPL I VN + S KY+++VTV+G +FWFMGF+S++KA N L +LS Sbjct: 107 EKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.192e-20 Identity = 47/106 (44.34%), Postives = 70/106 (66.04%), Query Frame = -1 Query: 270 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSL 587 E+L+ +FACYLST+ GPV G LY+STA++A+CSD L V+IPL + SVNP N ++KY+++++V+ HEFWFMGF+++E A L ++L Sbjct: 140 EQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTL 230
BLAST of CB304496 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.702e-19 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 258 EKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCF-TAPSGQEAWSYYKVMIPLANISSVNPVTVKENASDKYMKIVTVEGHEFWFMGFVSFEKATNHLLNSLSEYR 587 EKL +F CY+STT+GPV G +Y+S R+AFCSD + ++ G +YYKV++ ISS++ T S++Y+ +VT +G EFWFMGFVS+ A N L +L R Sbjct: 118 EKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLNSR 228 The following BLAST results are available for this feature:
BLAST of CB304496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304496 ID=CB304496; Name=CB304496; organism=Citrus sinensis; type=EST; length=590bpback to top |