CB304542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: R18A2_ARATH (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 5.464e-50 Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = -3 Query: 314 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLFM 610 WLRYQSRTGY NMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKL+TTYKA +PNLFM Sbjct: 80 WLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: R18A3_ARATH (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.041e-49 Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = -3 Query: 314 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLFM 610 WLRYQSRTGY NMYKEYRDTTLNG VEQMYTEMASRHRVR PCIQIIKTAT+PAKLCKRE TKQFHNSKIKFPLVFRKVRPPSRKL+TTYKA++PNLFM Sbjct: 80 WLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_CASSA (60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.488e-47 Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = -3 Query: 314 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLFM 610 WLRYQSRTGY NMYKEYRDTTLNGAVEQMY EMASRHRVR PCIQIIKTATIPAKLCKRES+KQFHNSKIKFPLV RK+RPPSRKL+T YKA+RPNLFM Sbjct: 80 WLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_ORYSJ (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.819e-45 Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = -3 Query: 314 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLFM 610 WLRYQSRTGY NMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQIIKTAT+ KLCKR++TKQFH S IKFPLV+RKVRPP+RKL+TT+KA+RPNLFM Sbjct: 80 WLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_DANRE (60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22 Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = -3 Query: 317 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 610 WLRY SR+G NMY+EYRD T +GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RPN F Sbjct: 81 WLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.392e-21 Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 317 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 610 WLRY SR+G NMY+EYRD T GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RPN F Sbjct: 81 WLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_BOVIN (60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.392e-21 Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 317 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 610 WLRY SR+G NMY+EYRD T GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RPN F Sbjct: 81 WLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_RAT (60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21 Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 317 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 610 WLRY SR+G NMY+EYRD T GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RPN F Sbjct: 81 WLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_MOUSE (60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21 Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 317 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 610 WLRY SR+G NMY+EYRD T GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RPN F Sbjct: 81 WLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
BLAST of CB304542 vs. ExPASy Swiss-Prot
Match: RL18A_ICTPU (60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21 Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 317 WLRYQSRTGYXNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLRTTYKATRPNLF 610 WLRY SR+G NMY+EYRD T +GAV Q Y +M +RHR R+ IQI+K I A C+R + KQFH+SKIKFPL R +R R+ + + RP F Sbjct: 81 WLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175 The following BLAST results are available for this feature:
BLAST of CB304542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304542 ID=CB304542; Name=CB304542; organism=Citrus sinensis; type=EST; length=612bpback to top |