CB304558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS33_ARATH (40S ribosomal protein S3-3 OS=Arabidopsis thaliana GN=RPS3C PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.511e-23 Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = -3 Query: 235 QPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 432 QP EYID+AVRHVLLRQGVLG+KVKIML WDP GKQGP TPLPD+V IH+PK+++ Y+ P V T Sbjct: 162 QPTKEYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVT 227
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS31_ARATH (40S ribosomal protein S3-1 OS=Arabidopsis thaliana GN=RPS3A PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.039e-21 Identity = 47/68 (69.12%), Postives = 52/68 (76.47%), Query Frame = -3 Query: 229 QPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 432 QP EYID+AVRHVLLRQGVLGIKVKIML WDP GK GP TPLPD+V IH+PKD+ Y P A + Sbjct: 162 QPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPV 229
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS32_ARATH (40S ribosomal protein S3-2 OS=Arabidopsis thaliana GN=RPS3B PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.357e-21 Identity = 48/65 (73.85%), Postives = 51/65 (78.46%), Query Frame = -3 Query: 238 QPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 432 QP EYIDSAVRHVLLRQGVLGIKVK+ML WDP G GP TPLPD+V IHSPK+EE P VA Sbjct: 162 QPTKEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVA 226
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_AMBME (40S ribosomal protein S3 OS=Ambystoma mexicanum GN=RPS3 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML+WDP+GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_RAT (40S ribosomal protein S3 OS=Rattus norvegicus GN=Rps3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.105e-18 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_MOUSE (40S ribosomal protein S3 OS=Mus musculus GN=Rps3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.105e-18 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS32_XENLA (40S ribosomal protein S3-B OS=Xenopus laevis GN=rps3-B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.105e-18 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS31_XENLA (40S ribosomal protein S3-A OS=Xenopus laevis GN=rps3-A PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 9.105e-18 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.189e-17 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_PIG (40S ribosomal protein S3 OS=Sus scrofa GN=RPS3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.189e-17 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216 The following BLAST results are available for this feature:
BLAST of CB304558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304558 ID=CB304558; Name=CB304558; organism=Citrus sinensis; type=EST; length=434bpback to top |