CB304573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.266e-36 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -3 Query: 408 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 635 NGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 7 NGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.685e-36 Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = -3 Query: 408 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 635 NGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+DGY LPKLYAK+ +CVSCAIH+H Sbjct: 7 NGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAH 82
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = -3 Query: 408 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 635 NGGRNKH RGHV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 7 NGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = -3 Query: 408 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 635 NGGRNKH RGHV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 7 NGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.558e-29 Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 NGGRNKH RGHVK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA ++D Y LPKLYAK+ YCVSCAIHS Sbjct: 7 NGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHS 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.828e-28 Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 NGGR KH RGHVK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY Y LPKLYAK+ YCVSCAIHS Sbjct: 7 NGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHS 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.693e-28 Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 N GRNKHGRGHVKF+RC NC + PKDKAIKR+ +RN+VE AA+RD+ EA VY YT+PKLY K+QYCVSCAIHS Sbjct: 7 NNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSCAIHS 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_SCHCO (40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.823e-28 Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = -3 Query: 408 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 635 NGGRNK GRGHV F+RCSNC +C KDKAIKRF VRN+VE AA+RD+ +A VY Y +PKLY K+ YCVSCAIHSH Sbjct: 7 NGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSH 82
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.300e-28 Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 N GR K GRGHVK+IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY+ Y LPKLYAK+ YCVSCAIHS Sbjct: 7 NNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYCVSCAIHS 81
BLAST of CB304573 vs. ExPASy Swiss-Prot
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.833e-27 Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = -3 Query: 411 NGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 635 N GRNK RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A Y Y LPKLY K+ YC++CAIHS Sbjct: 7 NHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHS 81 The following BLAST results are available for this feature:
BLAST of CB304573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304573 ID=CB304573; Name=CB304573; organism=Citrus sinensis; type=EST; length=637bpback to top |