CB304575

Overview
NameCB304575
Unique NameCB304575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length306
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB304575 vs. ExPASy Swiss-Prot
Match: SPCS1_ARATH (Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana GN=At2g22425 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = -1 
Query:  214 LVTVPNWPFFNRHPLKWLDPSEAEKHPKPQL 306
            LVTVPNWPF+N HPLKWLDPSEAEKHPKP++
Sbjct:   50 LVTVPNWPFYNLHPLKWLDPSEAEKHPKPEV 80
The following BLAST results are available for this feature:
BLAST of CB304575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SPCS1_ARATH1.152e-1187.10Probable signal peptidase complex subunit 1 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IVaR_G10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IVaR_G10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304575 ID=CB304575; Name=CB304575; organism=Citrus sinensis; type=EST; length=306bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAGCGAATTGTTTCTA
TCATTGTCTATAAATTCAAGCTGTTGGGCAAGCAAGCCAGTGCACTGTAT
CATCCTTTTTTAAGAAGACCACAGCCACAACAAAAAAGTAAAGAAGTTCC
TACCAAATGCTAACACCTGATAAGTCAATTTTTCTTAACAGATTTTTTCT
TCGAGTTGACAGCCAGCTGAGGCTTGGGATGTTTTTCAGCCTCGCTTGGA
TCCAACCACTTCAGAGGATGGCGATTAAAGAAAGGCCAGTTTGGCACAGT
TACCAG
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