CB304700

Overview
NameCB304700
Unique NameCB304700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13774 contig Csv1_Contig13774:1152..1845. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.638e-44
Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W MY+ +    EK   +L+QITET++HRN LD S+++IGV+L+GP K S +L+SV A GLPLVDDW CLKSMVR FETHCGSLTQYGMKHMRAF N+CNSGVS+A MEE  + AC G +    +P+  GYSA
Sbjct:  344 WQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.147e-43
Identity = 82/132 (62.12%), Postives = 98/132 (74.24%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W +YK +  GSEK  E+L+QI + ++HR+ LD+S+ +IG +LFGP K S IL SV   G PLVDDW CLKSMVR FET CGSLTQYGMKHMR FANICN+GVS   MEE    ACSG++  QWHP  +GYSA
Sbjct:  366 WQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.804e-43
Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W MY+ +   SE   ++LKQI ET++HR  +D S+++IGV+L+GP KGS +L SV A G  LVDDW CLKSMVR FETHCG+LTQYGMKHMRAFANICNSGVS+A MEE    AC G     +HP+ RGYSA
Sbjct:  364 WQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.392e-42
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQW--HPAIRGYSA 692
            WHMY+ + +GS K  + LK++TET RHR  LDAS+++I  ILFGP     +LN V   GLPLVDDW+CLKSMVR FE HCGSLTQYGMKHMRAFAN+CN+GVS+ LMEE S  AC G    ++  HP+I GYSA
Sbjct:  355 WHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAACGGYSEARYTVHPSILGYSA 486          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.477e-41
Identity = 78/132 (59.09%), Postives = 96/132 (72.73%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W +Y+ +    EK  ++LKQI E ++HR  LD S+++IGV+L+GP+K S +L SV   GLPLVDDW CLKSMVR +ETHCGSLTQYGMKHMRAFANICNSGVS+  ME+    AC G      HP+  GYSA
Sbjct:  362 WQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 4.794e-35
Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W  Y+ A EGS +  E  KQ+ E M HR  +D S+ ++G ILFG  +G  +LN V + G PLVDDW CLK+ VRAFE HCGSL+QYG+KHMR+FANICN+G+    MEE +  AC+      W    RG+SA
Sbjct:  363 WEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.108e-34
Identity = 67/132 (50.76%), Postives = 86/132 (65.15%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W  ++ A EGS K  E  KQ+ E M HR  +D S++++G +LFG +K   +LN+V   G  LVDDW CLK+MVR FETHCGSL+QYGMKHMR+FAN+CN G+ +  M E S  AC       W    RG+SA
Sbjct:  353 WDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.923e-34
Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W  ++ A EGS +  E  KQ+ E M HR  +D S+ +IG +LFG +KG+ +L+ V   G PLVD+W CLK+MV+ FETHCGSL+QYGMKHMR+FANICN+G+    M E S  AC+      W     G+SA
Sbjct:  362 WEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.042e-34
Identity = 68/132 (51.52%), Postives = 86/132 (65.15%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            W  Y+ A EG+ +  E  KQ  E M HR  +D SI +IG +LFG +KG  ILN+V   G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+ ANICN+G+ +  M E S  AC       W    +G+SA
Sbjct:  363 WDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB304700 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.542e-33
Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  297 WHMYKNAAEGSEKXXEMLKQITETMRHRNPLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRAFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEPACSGNELRQWHPAIRGYSA 692
            WH Y+ A EGS +  E  KQ+ E M HR  +D SI +IG++LFG + G  +LN V   G PLVDDW CLKS+VRAFE HCGSL+QYG+KHMR+ AN+CN+G+    MEE +  AC       W    RG+SA
Sbjct:  348 WHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
The following BLAST results are available for this feature:
BLAST of CB304700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
LEGU_CANEN9.638e-4462.12Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_RICCO2.147e-4362.12Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN2.804e-4362.12Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPEB_ARATH1.392e-4261.94Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPE2_PHAVU4.477e-4159.09Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH4.794e-3551.52Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE1_PHAVU3.108e-3450.76Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA6.923e-3450.00Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE_CITSI9.042e-3451.52Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEA_ARATH1.542e-3352.27Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304700 ID=CB304700; Name=CB304700; organism=Citrus sinensis; type=EST; length=694bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAACTTCTTCTGTATTGC
AGGTGAACAATGCAAGTTTTCTATTATTTCTGCAGTTGACTAAGAAAAAC
TAACACAACTGTACATCAAGGGTGGGAAATACAATAGGAATAGGGTCTTT
TAAAGCCAGTTCTACGACTCCGTCGCCTCCACAGTCCACACTAAACGTCC
TTTACATTTAGACAGCACCAAGGAAGAAAGCGCAACTATTGAATACAAGA
ACCAACAGTAATAAGCTTCTGCTTAAATGTTATCAGATCAATATCAAGCG
CTATAACCTCTAATTGCTGGATGCCATTGCCTCAGCTCATTGCCACTGCA
CGCAGGCTCAGAAGTTTCTTCCATCAAGGCTTGGGACACACCACTGTTGC
AGATATTGGCAAATGCCCTCATGTGTTTCATGCCATATTGAGTGAGTGAC
CCACAGTGAGTCTCGAAAGCACGAACCATTGATTTCAGGCATTGCCAGTC
ATCAACAAGAGGCAGGCCACGTGCTCCAACGGAATTAAGAATTCTAGAAC
CCTTATCTGGTCCAAATAAAATTACTCCAATCATATCAATACTTGCATCT
AAGGGGTTTCTGTGCCTCATTGTCTCTGTAATCTGCTTAAGCATTTCTGN
TNTCTTTTCTGATCCCTCTGCTGCATTTTTGTACATATGCCACA
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