CB304715

Overview
NameCB304715
Unique NameCB304715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:1..583. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = -1
Query:  176 FCCLIVLFLSVVPLLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPS-TKKFEAVVWEKPWEHFKSLTSSKP 508
            F  L+ L + ++PL A+     A VGGW PI +  +  V+EIG+FAV+EYNK+S+S L+FE+V  GETQVVSGTNYRL +   DG   +K + A+VW+KPW  F++LTS +P
Sbjct:    7 FLLLLSLVVVLLPLYASA---AARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEP 115          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17
Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = -1
Query:  173 GALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSSKPM 445
            G ++GG +P+ +  + H++++ +FAVTE+NK++ S LEFE +   + QVV+GT Y   + VK+G + K +EA VWEKPW  FK L   KP+
Sbjct:   44 GPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPV 134          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = -1
Query:  173 AAGDRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSSKPM 463
            +  D  G L GG K +  +  +  + E+ +FAV E+N+++ + L FE + K +TQVV+GT Y L + VKDG   K +EA VWEKPWE+FK L   KP+
Sbjct:   32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPV 129          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16
Identity = 50/117 (42.74%), Postives = 66/117 (56.41%), Query Frame = -1
Query:  176 RFCCLIVLFLSVVPLLAA---GDR-KGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSSKP 511
            R   L+ L L+V    AA   G+R  G LVGGW PI D  + H+ E+G +AV  +   S   L F  V  GE QVVSG NYRL++   D   +T  + AVV+E+ W + + LTS KP
Sbjct:    3 RIPLLLALLLAVSAAAAAQVGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKP 119          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = -1
Query:  173 LIVLFLSVVPLLAA--GDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSSKPM 499
            LI L L ++PL++   G   G  +G  KPI++  +  V+ + ++A+ E+NK+SK  L F  V +G TQVVSGT Y L +  KD G   K +EAVV EK W H KSL S K +
Sbjct:    6 LICLSLILLPLVSVVEGLGGGGGLGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.690e-13
Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = -1
Query:  179 KGALVGGWKPIEDPKEKHVME-IGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSSK 448
            K  ++GG   +   +    +E + +FA+ E+NKQ    LEF+ + K   QVV+GT Y L L  K+G  TK FEA VW KPW +FK L   K
Sbjct:   31 KTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFK 121          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = -1
Query:  176 KGALVGGWK--PIEDPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSSKP 448
            +G L+GG +  P     +   +E+ +FAV E+N ++ + LEFE + K   QVV+G  +   + VK+G + K +EA VWEK WE+FK L   KP
Sbjct:   13 RGVLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12
Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1
Query:  176 MNQRFCCLIVLF---LSVVPLLAAG----DRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSSKP 520
            M  RF   IV F   L +  L+A+     + + ALVGG   +  +     V  + +FAV E+NK+  + LEF  V K + QVV+GT + L L + +    K +EA VW KPW +FK L   KP
Sbjct:    2 MRSRFLLFIVFFSLSLFISSLIASDLGFCNEEMALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKP 124          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.959e-12
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = -1
Query:  185 LLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKS-ALEFESVEKGETQVVSGTNYRLILVVKDGPS--TKKFEAVVWEKPWEHFKSLTS 469
            LLAA     AL  GW PI++  + H+ E+G++A+TE N+ S S  L F  V  GE QVVSG NYRL +    G    T  + AVV+E+ W + + L S
Sbjct:    9 LLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLIS 106          
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.088e-12
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = -1
Query:  179 ALVGGWKPIEDPKEK-HVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSSK 442
            A +GG + +   +    +  + +FAV E+NK+  + LEF  V   + QVVSGT Y + L  KDG   K +EA VWEKPW +FK L   K
Sbjct:    2 AALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFK 90          
The following BLAST results are available for this feature:
BLAST of CB304715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYT5_ARATH9.362e-2550.89Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
CYT1_ORYSJ2.469e-1743.96Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE5.501e-1743.88Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYT8_ORYSJ3.566e-1642.74Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more]
CYT4_ARATH5.149e-1543.75Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more]
CYT3_ARATH3.690e-1341.76Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_HORVU1.402e-1239.78Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT6_ARATH4.080e-1237.40Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT6_ORYSJ6.959e-1242.86Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more]
CYTI_VIGUN9.088e-1241.57Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_H02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_H02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304715 ID=CB304715; Name=CB304715; organism=Citrus sinensis; type=EST; length=583bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAAACGGAAAATCGAAATC
TGAAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCACTC
ACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGTTA
TTTGTTAAACACCCTATTTAACCATAGGCTTAGACGAGGTGAGACTCTTG
AAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTCGA
AGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAACCA
CCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTCCAACGCGCTCTTTGAC
TGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGCTT
CTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTTAC
GGTCGCCGGCGGCCAGGAGAGGGACCACGGAGAGAAAGAGAACAATAAGA
CAGCAAAAACGTTGATTCATTTTCGTTGTTTTGGTAACCGTTCACACCAA
AGTCCGTGACTTCCGGTTCTTGAGTGAATCCCC
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