CB304749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.663e-42 Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = -3 Query: 227 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 562 + AEEGQVI CHTVE+WNEQLQKG K LIVVDFTASWC PC+ ++P L+ELAKKLP V FLKVDVDELK+VA EWAVE+MPTF+ KEGK+++++VGAKK ELQ + KH Sbjct: 1 MAAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.500e-40 Identity = 73/112 (65.18%), Postives = 94/112 (83.93%), Query Frame = -3 Query: 227 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 562 + +EEGQVI+CHTVE+WNEQLQK +K L+VVDFTASWC PC+ ++P ++LAKKLP V+FLKVD DELKSVA +WA++AMPTF+ KEGK+L+++VGAKK ELQ + KH Sbjct: 1 MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.341e-40 Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = -3 Query: 227 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 556 AEEGQVI HTV++WNE LQKGI KKLIVVDFTASWC PCK ++ +ELAKK+P V FLKVDVDELKSVA +WAVEAMPTF+ KEGK+++++VGAKK ELQ + KH Sbjct: 2 AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.166e-39 Identity = 72/110 (65.45%), Postives = 91/110 (82.73%), Query Frame = -3 Query: 227 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 556 +EEGQV CH VE WNE +KG+ KKL+VVDFTASWC PC+ ++PIL+++AKK+P VIFLKVDVDELK+V+ EW+VEAMPTFV K+GK ++R+VGAKK ELQ + KH Sbjct: 9 SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKH 118
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 9.417e-35 Identity = 69/110 (62.73%), Postives = 87/110 (79.09%), Query Frame = -3 Query: 227 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 556 AEE QVI+CHTV+ WNE+ QK + KLIV+DFTASWC PC++++P +SELAKK P V F KVDVD+LK VAEE+ VEAMP+FV+ KEG+ +ERIVGA+K EL + H Sbjct: 2 AEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVH 111
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.673e-34 Identity = 62/110 (56.36%), Postives = 88/110 (80.00%), Query Frame = -3 Query: 227 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 556 A EG+VI+CHT+E WNE+++ +KKLIV+DFTASWCPPC+ ++P+ +E+AKK V+F K+DVDEL++VA+E+ VEAMPTFV KEG +++R+VGA K E+ + KH Sbjct: 2 AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 3.956e-33 Identity = 66/113 (58.41%), Postives = 88/113 (77.88%), Query Frame = -3 Query: 227 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKK-LPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 562 + AEEGQVI CHT + W QL K + KLIV+DFTASWCPPC++++PI ++LAKK + + IF KVDVDEL+SVA+E+ VEAMPTFV K G+V++++VGA K +LQ + KH Sbjct: 1 MAAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.167e-33 Identity = 63/110 (57.27%), Postives = 86/110 (78.18%), Query Frame = -3 Query: 227 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 556 A EG+VI+CHTVE W E+L+ +KKLIV+DFTA+WCPPC+ ++P+ ++LAKK V+F KVDVDEL +VAEE+ V+AMPTF+ KEG++ E +VGA K E+ +EKH Sbjct: 2 AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 6.748e-33 Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = -3 Query: 227 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 547 G+VIS H++E W Q+++ AAKKL+V+DFTASWC PC++M+PI ++LAKK PA +FLKVDVDELK +AE+++VEAMPTF+ KEG V +R+VGA K EL V H Sbjct: 18 GEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLH 124
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.503e-32 Identity = 62/113 (54.87%), Postives = 88/113 (77.88%), Query Frame = -3 Query: 227 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKK-LPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 562 + AEEGQVI CH ++ W QL + KLIV+DFTASWCPPC++++P+ ++LAKK + + IF KVDVDEL++VA+E+ VEAMPTFVL K+G V++++VGA+K +L + KH Sbjct: 1 MAAEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113 The following BLAST results are available for this feature:
BLAST of CB304749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304749 ID=CB304749; Name=CB304749; organism=Citrus sinensis; type=EST; length=567bpback to top |