CB304806

Overview
NameCB304806
Unique NameCB304806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:6..589. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = -2
Query:  182 FCCLIVLFLSVVPLLAAGARKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPS-TKKFEAVVWEKPWEHFKSLPSFKP 514
            F  L+ L + ++PL A+ A   A VGGW PI +  +  V+EIG+FAV+EYN +S+S LKFE+V  GETQVVSGTNYRL +   DG   +K + A+VW+KPW  F++L SF+P
Sbjct:    7 FLLLLSLVVVLLPLYASAA---ARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEP 115          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17
Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = -2
Query:  179 GALVGGWKPIEDPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKPM 451
            G ++GG +P+ +  + H++++ +FAVTE+N ++ S L+FE +   + QVV+GT Y   + VK+G + K +EA VWEKPW  FK L  FKP+
Sbjct:   44 GPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPV 134          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  179 GALVGGWKPIE-DPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKPM 451
            G L GG K +  +  +  + E+ +FAV E+N ++ + L FE + K +TQVV+GT Y L + VKDG   K +EA VWEKPWE+FK L  FKP+
Sbjct:   38 GMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPV 129          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16
Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = -2
Query:  182 RFCCLIVLFLSVVPLLAA---GAR-KGALVGGWKPIEDPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLPSFKP 517
            R   L+ L L+V    AA   G R  G LVGGW PI D  + H+ E+G +AV  + + S   L+F  V  GE QVVSG NYRL++   D   +T  + AVV+E+ W + + L SFKP
Sbjct:    3 RIPLLLALLLAVSAAAAAQVGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKP 119          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15
Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = -2
Query:  179 LIVLFLSVVPLLAA--GARKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLPSFKPM 505
            LI L L ++PL++   G   G  +G  KPI++  +  V+ + ++A+ E+N +SK  L F  V +G TQVVSGT Y L +  KD G   K +EAVV EK W H KSL SFK +
Sbjct:    6 LICLSLILLPLVSVVEGLGGGGGLGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = -2
Query:  185 KGALVGGWKPIEDPKEKHVME-IGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFK 454
            K  ++GG   +   +    +E + +FA+ E+N Q    L+F+ + K   QVV+GT Y L L  K+G  TK FEA VW KPW +FK L  FK
Sbjct:   31 KTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFK 121          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.294e-13
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -2
Query:  182 KGALVGGWK--PIEDPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKP 454
            +G L+GG +  P     +   +E+ +FAV E+N ++ + L+FE + K   QVV+G  +   + VK+G + K +EA VWEK WE+FK L  FKP
Sbjct:   13 RGVLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.831e-12
Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = -2
Query:  188 LLAAGARKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNNQSKS-ALKFESVEKGETQVVSGTNYRLILVVKDGPS--TKKFEAVVWEKPWEHFKSLPSF 475
            LLAA     AL  GW PI++  + H+ E+G++A+TE N  S S  L F  V  GE QVVSG NYRL +    G    T  + AVV+E+ W + + L SF
Sbjct:    9 LLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISF 107          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 9.088e-12
Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = -2
Query:  182 MNQRFCCLIVLF---LSVVPLLAAGA----RKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKP 526
            M  RF   IV F   L +  L+A+       + ALVGG   +  +     V  + +FAV E+N +  + L+F  V K + QVV+GT + L L + +    K +EA VW KPW +FK L  FKP
Sbjct:    2 MRSRFLLFIVFFSLSLFISSLIASDLGFCNEEMALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKP 124          
BLAST of CB304806 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = -2
Query:  185 ALVGGWKPIEDPKEK-HVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFK 448
            A +GG + +   +    +  + +FAV E+N +  + L+F  V   + QVVSGT Y + L  KDG   K +EA VWEKPW +FK L  FK
Sbjct:    2 AALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFK 90          
The following BLAST results are available for this feature:
BLAST of CB304806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYT5_ARATH2.464e-2551.79Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
CYT1_ORYSJ3.225e-1742.86Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE4.212e-1746.74Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYT8_ORYSJ2.090e-1642.74Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more]
CYT4_ARATH1.037e-1543.75Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more]
CYT3_ARATH4.819e-1340.66Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_HORVU6.294e-1339.78Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT6_ORYSJ1.831e-1243.43Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more]
CYT6_ARATH9.088e-1236.59Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYTI_VIGUN1.187e-1140.45Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_C01 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_C01 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304806 ID=CB304806; Name=CB304806; organism=Citrus sinensis; type=EST; length=584bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAAAGAAAATGGAAAATC
GAAATCTGAAAGACTCACCTTTGACATTCATAAACAATATAATAATATCA
TCACTCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCA
TTGTTATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGGGAGA
CTCTTGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTT
GGTCGAAGGGCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGG
AAACCACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTC
TTTGACTGGTTGTTGTACTCCGTCACCGCGAACTGCCCGATCTCCATCAC
GTGCTTCTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTC
CTTTACGGGCGCCGGCGGCCAGGAGAGGGACCACGGAGAGAAAGAGAACA
ATAAGACAGCAAAAACGTTGATTCATTTTCGTTGTTTTGGTAACCGTTCA
CACCAAAGTCCGTGACTTCCGGTTCTTGAGTCCC
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