CB304826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.495e-30 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL+ N NY AG+AIGFDGL +PE VA D SFK A+WFWMT VHSV+NQGF T + ING EC G+N+DQ DR++ Y YC FGV PG L C Sbjct: 187 RGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.331e-30 Identity = 61/102 (59.80%), Postives = 71/102 (69.61%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALWFWM VH V+ QGF TIR ING EC G+N V RV Y DYC++FGVDPG L C Sbjct: 187 RGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 4.351e-30 Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALWFWM VH V++QGF TIR ING EC G+N V RV Y DYC++FGV PG L C Sbjct: 184 RGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.319e-28 Identity = 59/102 (57.84%), Postives = 69/102 (67.65%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AG A FDGL +PETV+ D V+SFKTALW+WM +V V+NQGF TIR ING EC G N V RV YT+YC++ GV G L C Sbjct: 169 RGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+Q++ N NY AGRAIGFDGL P VARD V++FK ALWFWM VH V+ QGF T R + ECGG N Q+ RV Y YC++ GVDPG L C Sbjct: 168 RGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 4.502e-27 Identity = 58/102 (56.86%), Postives = 68/102 (66.67%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+Q++ N NY AGR IGF+GL P VA+D VI+FKTALWFWM VH V+ QGF TIR ING EC G N Q+ RV Y YC++ VDPG L C Sbjct: 179 RGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.003e-26 Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHS--VLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+Q++ N NY AG++IGFDGL P+ VAR V++F+TALW+W VH V QGF TIR ING EC G+N V +RV Y +C++FGVDPGS L C Sbjct: 168 RGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26 Identity = 57/106 (53.77%), Postives = 71/106 (66.98%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFW----MTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL+ N NYI+AG+ + FDGLN P+ V RD +ISFKT+LWFW + YV NQGF TIR ING EC G N Q++ RV Y +YC + GV PG+ L C Sbjct: 145 RGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 3.944e-23 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSVLNQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY G+++ + L PE V+ + ++F+T LWFWM V VLNQGF TIR ING EC G N V R+R Y DYC + GVDPG L C Sbjct: 168 RGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.455e-19 Identity = 55/123 (44.72%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALWFWMT H V+ GF ING ECG ++V DR+ Y YC GV PG L+C Sbjct: 191 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDC 313 The following BLAST results are available for this feature:
BLAST of CB304826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304826 ID=CB304826; Name=CB304826; organism=Citrus sinensis; type=EST; length=467bpback to top |