CB304868

Overview
NameCB304868
Unique NameCB304868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB304868_ssr588 microsatellite CB304868_ssr588:588..597. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304868 vs. ExPASy Swiss-Prot
Match: Y1089_ARATH (Uncharacterised protein At1g10890 OS=Arabidopsis thaliana GN=At1g10890 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14
Identity = 48/96 (50.00%), Postives = 56/96 (58.33%), Query Frame = -3 
Query:   30 LIEEETARRVEEAIRKKVEESLNSEEIKMEIQRRLEEGRKRLLDEVESQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENRRKVEESQRREAEE 317
            LIEEET +RVEEAIRKKVEESL SE+IKMEI   LEEGRKRL +EV +Q                               EN ++VEE+QR+EA E
Sbjct:  128 LIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAME 223
The following BLAST results are available for this feature:
BLAST of CB304868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1089_ARATH6.420e-1450.00Uncharacterised protein At1g10890 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IaR_C09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IaR_C09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304868 ID=CB304868; Name=CB304868; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCTCAGCTTCCCTTCTTTG
AGATTCTTCCACCTTCCTCCTGTTCTCTTCGAGCATTTTCTCCAATTCTT
CTTTTTCTTTTCGAGCTTGTTCCTCCTTTCTTCTAGCCTCAGTAAGAGCA
GCTTCCTTTTCTTTCTCAAGCTGAGATTCAACTTCATCGAGAAGCCTCTT
CCTCCCCTCCTCCAATCGCCTTTGTATTTCCATCTTTATCTCCTCAGAGT
TCAAGCTCTCTTCAACTTTCTTCCTAATCGCCTCTTCCACTCTCCTAGCA
GTCTCTTCCTCTATCAGTTTCAGTTCTGCTTCTTGTTGACGCCTTTTTTT
CTCTTCCTCTTCTTTCCTCAATTTTTCACTTGCACTTTTCCGCTCTAATG
ACCCAAGACTTGGACTCGAAGATTTATGGGCAGCAGACAATGAAAAACTC
CTACTTCTTTGCCTCTTATACCGCCTTGGAGTTGGCGAACGGCTTTTATG
CCTTCTTGGAGAAGGAGAACGACCTTTACGGCGTCGTGGAGAAATTGAGC
GGCTTTTTTTTCTGCTATAAGAATATGGCGACCGGCTTCTCTCTCTCCGG
CTCCTCCTGCTATACCTGGGTG
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