CB304993

Overview
NameCB304993
Unique NameCB304993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig362 contig Csv1_Contig362:1..577. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
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BLAST of CB304993 vs. ExPASy Swiss-Prot
Match: UCR11_SOLTU (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = -3 
Query:  302 MLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLNQPFDWLKKTFLEKSEEK 454
            + KFL+PK R Q  D+QAAA WGVAAV+GAL++ QP+D+L+KTF+EK EE+
Sbjct:   11 LFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQPWDFLRKTFIEKQEEE 61
The following BLAST results are available for this feature:
BLAST of CB304993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UCR11_SOLTU6.707e-1262.75Ubiquinol-cytochrome c reductase complex 6.7 kDa p... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_D02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_D02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304993 ID=CB304993; Name=CB304993; organism=Citrus sinensis; type=EST; length=576bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTAAAACTTCAATGAAAGAAA
AAGAATTTCATCACTTCCTTTTTAAGGAGAAAGGGCGCGAGAATGCTCAC
GAAGAAATTTCAATGAAAATTAACACAAACTTGCGGGTCTGAGCAAATCA
AATATTCTCAAAAGTTAAATGCCAAAAGGCCTTAGGACATGTAGTAGAAA
ATGAAACTACATTATTTCAGAACAAATATGTCCATGTTCTTCCATCCACA
ACCCAAAAGCAGACATCAAAAAGCTTCACCAGATCGTCAACGTCAATTTT
ATTTTTCTTCAGACTTCTCCAAAAAGGTCTTCTTCAACCAATCAAATGGT
TGGTTGAGGTAAAGAGCACCGGAGACAGCAGCGACACCCCAGAAGGCGGC
GGCCTGTACGTCTACGGGTTGCAGACGCGACTTCGGCTTCAGAAACTTCA
ACATCGAAGCTTCGCCTGCCATTTCTTCTTGGATTTGTAAACCCTAACCA
AACTTTTTAATGCACCAAATCTTTGTTCGTCGAATGCCACTGTCAATGAC
CACCAATCCAACGTTTTTCCTTCTCC
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