CB305030

Overview
NameCB305030
Unique NameCB305030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K_ARATH (Phosphatidylinositol 3-kinase VPS34 OS=Arabidopsis thaliana GN=At1g60490 PE=2 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 6.193e-69
Identity = 124/134 (92.54%), Postives = 127/134 (94.78%), Query Frame = -2
Query:  196 DDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 582
            DDGRLFHVDF +ILGRDPKPFPPPMKLCKEMVEAMGGAE     RFKSYCCEAYNILRKSSNLILNLFHLMAGS IPDIASDPEKGILKLQEKFRLD+DDEAC+HFFQDLINESVSALFPQMVETIHRWAQYWR
Sbjct:  681 DDGRLFHVDFAFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSTIPDIASDPEKGILKLQEKFRLDMDDEACIHFFQDLINESVSALFPQMVETIHRWAQYWR 814          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K1_SOYBN (Phosphatidylinositol 3-kinase, root isoform OS=Glycine max PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.602e-67
Identity = 123/134 (91.79%), Postives = 127/134 (94.78%), Query Frame = -2
Query:  196 DDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 582
            +DG LFHVDFG+ILGRDPKPFPPPMKLCKEMVEAMGGAE     RFKSYCCEAYNILRKSSNLILNLF+LMAGSNIPDIASDPEKGILKLQEKFRLDLDDEA +HFFQDLINESVSALFPQMVETIHRWAQYWR
Sbjct:  681 NDGGLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEASIHFFQDLINESVSALFPQMVETIHRWAQYWR 814          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K2_SOYBN (Phosphatidylinositol 3-kinase, nodule isoform OS=Glycine max PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 9.887e-67
Identity = 122/134 (91.04%), Postives = 127/134 (94.78%), Query Frame = -2
Query:  196 DDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 582
            +DG LFHVDFG+ILGRDPKPFPPPMKLCKEMVEAMGGAE     RFKSYCCEAY+ILRKSSNLILNLF+LMAGSNIPDIASDPEKGILKLQEKFRLDLDDEA +HFFQDLINESVSALFPQMVETIHRWAQYWR
Sbjct:  679 NDGGLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYHILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEASIHFFQDLINESVSALFPQMVETIHRWAQYWR 812          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PK3C3_RAT (Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus GN=Pik3c3 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.783e-42
Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = -2
Query:  196 GRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 576
            G+LFH+DFGYILGRDPKP PPPMKL KEMVE MGG +      F+  C  A+  LR+ SNLILNLF LM  +NIPDIA +P+K + K+Q+KFRLDL DE  VH+ Q LI+ESV ALF  +VE IH++AQYWR
Sbjct:  755 GKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWR 886          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PK3C3_PIG (Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Sus scrofa GN=PIK3C3 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.783e-42
Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = -2
Query:  196 GRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 576
            G+LFH+DFGYILGRDPKP PPPMKL KEMVE MGG +      F+  C  A+  LR+ SNLILNLF LM  +NIPDIA +P+K + K+Q+KFRLDL DE  VH+ Q LI+ESV ALF  +VE IH++AQYWR
Sbjct:  755 GKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWR 886          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PK3C3_MOUSE (Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Mus musculus GN=Pik3c3 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.783e-42
Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = -2
Query:  196 GRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 576
            G+LFH+DFGYILGRDPKP PPPMKL KEMVE MGG +      F+  C  A+  LR+ SNLILNLF LM  +NIPDIA +P+K + K+Q+KFRLDL DE  VH+ Q LI+ESV ALF  +VE IH++AQYWR
Sbjct:  755 GKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWR 886          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PK3C3_HUMAN (Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Homo sapiens GN=PIK3C3 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.783e-42
Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = -2
Query:  196 GRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 576
            G+LFH+DFGYILGRDPKP PPPMKL KEMVE MGG +      F+  C  A+  LR+ SNLILNLF LM  +NIPDIA +P+K + K+Q+KFRLDL DE  VH+ Q LI+ESV ALF  +VE IH++AQYWR
Sbjct:  755 GKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWR 886          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K4_DICDI (Phosphatidylinositol 3-kinase VPS34-like OS=Dictyostelium discoideum GN=pikE PE=3 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 3.783e-42
Identity = 80/133 (60.15%), Postives = 101/133 (75.94%), Query Frame = -2
Query:  196 DGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGA-----ERFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 579
            +G+LFH+DFGYILG+DPK  PPPMKLCKEMV  MGG      E+FK  CCEAYNILRKSS+LILNLF LM  ++IP I+ D EK ILK+QEK +L+L D+   +    L+N+SV+ALFP ++E  H+W QYW+
Sbjct:  683 NGKLFHIDFGYILGKDPKILPPPMKLCKEMVLGMGGENSKHYEKFKQLCCEAYNILRKSSHLILNLFALMVDASIPSISDDKEKSILKVQEKLQLELTDQEASNSLLQLLNDSVTALFPVIIEMAHKWLQYWK 815          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PK3C3_XENLA (Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Xenopus laevis GN=pik3c3 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.428e-42
Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = -2
Query:  196 GRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAER-----FKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 576
            G+LFH+DFGYILGRDPKP PPPMKL KEMVE MGG +      F+  C  A+  LR+ SNLILNLF LM  +NIPDIA +P+K + K+Q+KFRLDL DE  VH+ Q LI++SV+ALF  +VE IH++AQYWR
Sbjct:  754 GKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQAFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQTLIDDSVNALFAAVVEQIHKFAQYWR 885          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: VPS34_YEAST (Phosphatidylinositol 3-kinase VPS34 OS=Saccharomyces cerevisiae GN=VPS34 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.645e-37
Identity = 74/133 (55.64%), Postives = 98/133 (73.68%), Query Frame = -2
Query:  196 DGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 579
            DG  FH DFGYILG+DPKPFPP MKL  +++EA GGAE     +F+SYC  AY+ILR+++ LILNLF LM  SNIPDI  DP   IL+++E+F L++ +E     FQ+LIN+SV+AL P +++ +H  AQYWR
Sbjct:  742 DGHFFHADFGYILGQDPKPFPPLMKLPPQIIEAFGGAESSNYDKFRSYCFVAYSILRRNAGLILNLFELMKTSNIPDIRIDPNGAILRVRERFNLNMSEEDATVHFQNLINDSVNALLPIVIDHLHNLAQYWR 874          
The following BLAST results are available for this feature:
BLAST of CB305030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PI3K_ARATH6.193e-6992.54Phosphatidylinositol 3-kinase VPS34 OS=Arabidopsis... [more]
PI3K1_SOYBN2.602e-6791.79Phosphatidylinositol 3-kinase, root isoform OS=Gly... [more]
PI3K2_SOYBN9.887e-6791.04Phosphatidylinositol 3-kinase, nodule isoform OS=G... [more]
PK3C3_RAT3.783e-4262.88Phosphatidylinositol 3-kinase catalytic subunit ty... [more]
PK3C3_PIG3.783e-4262.88Phosphatidylinositol 3-kinase catalytic subunit ty... [more]
PK3C3_MOUSE3.783e-4262.88Phosphatidylinositol 3-kinase catalytic subunit ty... [more]
PK3C3_HUMAN3.783e-4262.88Phosphatidylinositol 3-kinase catalytic subunit ty... [more]
PI3K4_DICDI3.783e-4260.15Phosphatidylinositol 3-kinase VPS34-like OS=Dictyo... [more]
PK3C3_XENLA8.428e-4262.12Phosphatidylinositol 3-kinase catalytic subunit ty... [more]
VPS34_YEAST1.645e-3755.64Phosphatidylinositol 3-kinase VPS34 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_A12 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_A12 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305030 ID=CB305030; Name=CB305030; organism=Citrus sinensis; type=EST; length=583bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGAGATAATTGTTATTAG
CTAAAAGTTTATCGGAATACAGATCAAATGATACAGCCAAGAATTATTAT
ATACAAACATTTTACAACATTGTTAATGTTCTGTTCTACCGAAGGTGTCT
TCTATCCTTCATACTCACTGTCAATCTAATTTGGTTCTGAGATCAGCGCC
AGTATTGAGCCCACCGATGTATGGTCTCAACCATTTGAGGGAACAAAGCG
CTAACACTTTCATTGATAAGATCCTGGAAGAAGTGTACACAGGCCTCATC
GTCCAAGTCCAACCGAAACTTCTCTTGAAGCTTAAGGATGCCTTTCTCAG
GATCAGAAGCTATGTCAGGAATGTTTGAACCCGCCATCAGATGAAACAGA
TTTAAAATAAGGTTACTAGATTTTCGGAGGATGTTGTATGCTTCACAACA
GTAGGACTTGAACCTTTCCGCTCCTCCCATAGCCTCAACCATTTCTTTGC
ACAGCTTCATTGGAGGGGGAAATGGCTTGGGATCTCGCCCAAGAATATAA
CCAAAATCCACATGGAAAAGACGCCCATCATCC
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