CB305123

Overview
NameCB305123
Unique NameCB305123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:574..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.531e-39
Identity = 83/92 (90.22%), Postives = 85/92 (92.39%), Query Frame = -3
Query:  271 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES 546
            S+L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYK STLIMQLLRDNL LWTSDL EEGGE SKGDE Q E+
Sbjct:  162 SDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDL-EEGGEHSKGDERQGEN 252          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.922e-39
Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = -3
Query:  271 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES 546
            ++L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYK STLIMQLLRDN  LWTSDL EEGGE SKGDE Q E+
Sbjct:  161 ADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWTSDL-EEGGEHSKGDERQGEN 251          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.169e-37
Identity = 77/92 (83.70%), Postives = 84/92 (91.30%), Query Frame = -3
Query:  274 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQS-KGDEVQAE 546
            +ELP THPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAIAELD+LSEESYK STLIMQLLRDNL LWTSDLPE+GGE + K +E + E
Sbjct:  167 TELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQE 258          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.584e-36
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = -3
Query:  289 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 546
            +ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+L+EESYK STLIMQLLRDNL LWTSD+PE+G +  K +
Sbjct:  164 AELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKAN 249          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 4.609e-36
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = -3
Query:  289 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGD 546
            +EL PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELDSL+E+SYK STLIMQLLRDNL LWTSDLPE+  +  KGD
Sbjct:  164 AELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQKGD 249          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.020e-36
Identity = 71/84 (84.52%), Postives = 79/84 (94.05%), Query Frame = -3
Query:  295 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSK 546
            ++LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+L+EESYK STLIMQLLRDNL LWTSD+PE+G +  K
Sbjct:  164 ADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 247          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.341e-35
Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = -3
Query:  274 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAE 546
            +EL  THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LSEESYK STLIMQLLRDNL LWTSD+PE+G EQ K D  +A+
Sbjct:  164 AELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEEQ-KVDSARAD 253          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.987e-35
Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = -3
Query:  298 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQS 546
            ++LPPTHPIRLGLALNFSVFYYEI+N+PERACHLAKQAFDEAI+ELD+L+EESYK STLIMQLLRDNL LWTSD+ EEGG+ +
Sbjct:  164 AKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDA 246          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.096e-35
Identity = 75/95 (78.95%), Postives = 82/95 (86.32%), Query Frame = -3
Query:  262 SELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKGDEVQAES*PG 546
            +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELDSLSEESYK STLIMQLLRDNL LWTSD+ E+  E+ K D  + ES  G
Sbjct:  168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEMK-DAPKGESGDG 261          
BLAST of CB305123 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.096e-35
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = -3
Query:  271 LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKGSTLIMQLLRDNLPLWTSDLPEEGGEQSKG-DEVQAES 540
            L PTHP+RLGLALNFSVFYYEILNSPE AC LAKQAFD+AIAELDSL+EESYK STLIMQLLRDNL LWTSDL EEG E++KG DE Q E+
Sbjct:  164 LAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGADEPQDEN 254          
The following BLAST results are available for this feature:
BLAST of CB305123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14337_SOLLC1.531e-3990.2214-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
1433_TOBAC9.922e-3988.0414-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
14312_ARATH4.169e-3783.7014-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
1433B_VICFA1.584e-3683.7214-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
14339_SOLLC4.609e-3683.7214-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
1433D_SOYBN6.020e-3684.5214-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
1433C_SOYBN1.341e-3582.4214-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14339_ARATH2.987e-3583.1314-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
1433B_HORVU5.096e-3578.9514-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14310_ARATH5.096e-3582.4214-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305123 ID=CB305123; Name=CB305123; organism=Citrus sinensis; type=EST; length=548bp
TTTTNNNTTTTTTTTTTTTTTTTTTTTTTTCAAACCTAGAACTAAAATAG
TTTTCAAACTAGCACTAAAATAGCATAGCAAGTCCTATCACGAGAAGTAG
CAAACTCAATTATATGTAAACAGAAAATAGCACAACAACCTGAAATTAAA
AACATGTAATAAGTATTATACAAGCCAAATGTTCTTTCAATCCCTATACT
ACTAATACTAATAGATATTAGAACCCAACTAGCACAATTTCTCCTCCTGA
TGCTCATGCATCCCCGGCTAGCTCTCTGCTTGAACTTCATCACCTTTAGA
TTGCTCACCTCCCTCCTCCGGTAGATCCGAGGTCCACAAGGGGAGATTAT
CCCGAAGAAGCTGCATAATAAGGGTGCTGCCCTTGTAGGACTCTTCACTA
AGGCTATCAAGTTCAGCAATAGCCTCATCAAATGCTTGTTTAGCCAGGTG
GCAAGCCCTCTCAGGTGAGTTCAAAATCTCATAGTAGAAAACAGAAAAGT
TAAGAGCCAGGCCAAGTCTGATTGGATGAGTCGGGGGTAACTCTGAGG
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