CB322081

Overview
NameCB322081
Unique NameCB322081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length281
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.287e-33
Identity = 64/93 (68.82%), Postives = 81/93 (87.10%), Query Frame = 3
Query:    3 SSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            SSTMVASLKGDVYGFGIVLLEL++GQKPL V    EGFKG+LVDWV+  +  GRS+D +D+S+  +G+D+EI+QFL++ACSCVVSRPK+RP+M
Sbjct:  477 SSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVVSRPKERPTM 569          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.102e-30
Identity = 61/93 (65.59%), Postives = 78/93 (83.87%), Query Frame = 3
Query:    3 SSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            SSTMVASL GDVYGFGIVLLE+++GQKP+ +   EEGFK +LV+WV+  +  GRS+D +D+ ++G+G DDEIMQ LR+ACSCVVSRPK+RP M
Sbjct:  464 SSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFGKGYDDEIMQVLRIACSCVVSRPKERPLM 556          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.133e-20
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:    3 SSTMVASLKGDVYGFGIVLLELLSGQKPLDVA------GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSR-PKDRPSM 281
            S TMVA+ KGDVY FG+VLLEL++GQK   V         EE FKGNLV+W+  L    + ++ +D+SL G G DDEI + L+VAC+CV+    K RP+M
Sbjct:  480 SRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCVLPEIAKQRPTM 579          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 2.728e-13
Identity = 36/88 (40.91%), Postives = 57/88 (64.77%), Query Frame = 3
Query:   15 VASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 278
            VA+ KGDVY FG+VLLELL+ ++P+D+    +G + +L+ WV  +    R+ +V D  +Y + ND E+ + L +AC C+   PK RP+
Sbjct:  912 VATYKGDVYSFGVVLLELLTDKRPVDMC-KPKGCR-DLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPT 997          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.078e-13
Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 3
Query:   15 VASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 278
            VA+ KGDVY FG+VLLELL+G++P+DV   +     +L+ WV  +    R  ++ D  +Y + + +E++  L +AC C+   PK RP+
Sbjct:  921 VATYKGDVYSFGVVLLELLTGRRPMDV--CKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPT 1006          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.037e-12
Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 3
Query:   15 VASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            VA+L+GDVY FG+V+LELL+G++P++V   +      LV WV+ +   G+  +V D  L   GN++ +++ L +AC CV   P  RP++
Sbjct:  981 VATLRGDVYSFGVVMLELLTGKRPMEVFRPK--MSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIACMCVNQNPMKRPNI 1067          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.016e-12
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   27 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY-GRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            KGDVY +G++LLELLSG+KP+D    E G   NLV W   L    R  +++D  L   +  D E++ +L++A  C+  RP  RP+M
Sbjct: 1042 KGDVYSYGVILLELLSGKKPID--PEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTM 1125          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.940e-12
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 3
Query:   27 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY-GRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            KGDVY +G++LLELLSG+KP+D    E G   NLV W   L    R  +++D  L   +  D E+  +L++A  C+  RP  RP+M
Sbjct: 1044 KGDVYSYGVILLELLSGKKPID--PGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTM 1127          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12
Identity = 36/88 (40.91%), Postives = 56/88 (63.64%), Query Frame = 3
Query:   18 ASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            A+ K DVY FG+++LE+LSG+ P D +  E+GF  N+V W+N L+   R++++VD S  G    + +   L +A  CV S P +RP+M
Sbjct:  480 ATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGF--NIVGWLNFLISENRAKEIVDLSCEG-VERESLDALLSIATKCVSSSPDERPTM 564          
BLAST of CB322081 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 3
Query:    6 STMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSM 281
            ST  +S K DV+G+G++LLEL++GQ+  D+A         L+DWV  L+   +   +VD  L G   D+E+ Q ++VA  C  S P +RP M
Sbjct:  465 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 556          
The following BLAST results are available for this feature:
BLAST of CB322081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
Y1719_ARATH5.287e-3368.82Probable inactive receptor kinase At1g27190 OS=Ara... [more]
Y1699_ARATH1.102e-3065.59Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH5.133e-2050.00Probably inactive leucine-rich repeat receptor-lik... [more]
PSKR1_ARATH2.728e-1340.91Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PSKR1_DAUCA6.078e-1338.64Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PSYR1_ARATH1.037e-1239.33Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
BRL3_ARATH3.016e-1241.86Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
BRL1_ARATH3.940e-1241.86Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
FEI2_ARATH6.720e-1240.91LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH6.720e-1239.13BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

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Properties
Property NameValue
Genbank descriptionEST0187 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB002 similar to leucine-rich repeat transmembrane protein kinase (acc# NP_174039), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322081 ID=CB322081; Name=CB322081; organism=Citrus sinensis; type=EST; length=281bp
ACTCAAGCACCATGGTTGCTTCGTTGAAAGGGGACGTTTATGGTTTTGGG
ATTGTTCTTTTAGAGTTGCTCTCAGGGCAAAAGCCTCTTGACGTGGCTGG
TGCAGAAGAAGGATTCAAGGGAAATTTGGTGGATTGGGTTAACCATCTAG
TGATCGCTGGTCGAAGCAGAGATGTTGTTGATAAGTCTCTGTATGGGAGA
GGTAATGATGATGAGATTATGCAGTTTCTGAGGGTTGCTTGTAGTTGTGT
GGTTTCAAGGCCCAAGGATAGGCCTTCTATG
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