CB322136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.827e-34 Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD TSV+HLFPITK Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITK 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.822e-34 Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS G+G GYDRHITIFSPEGRL+QVEYAFKAVK+AGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 1.403e-33 Identity = 68/74 (91.89%), Postives = 72/74 (97.30%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GSGGGY+RHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKLLD+TSVTHLFPITK Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITK 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 4.082e-33 Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GSG GYDRHITIFSPEGRLFQVEYAFKAVK AG+TSIGVRGKDSVCVVTQKKVPDKLLD +SVTHLFPITK Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITK 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.331e-33 Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GSG GYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD +SV+HLFP+TK Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTK 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.092e-25 Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITE 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.092e-25 Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITE 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.092e-25 Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITE 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.092e-25 Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 84 MSIGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 MS GS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITE 74
BLAST of CB322136 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.242e-22 Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 105 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITK 305 G+DR IT+FSPEGRL+QVEYAFKA AG+TS+GV GK+ CV++QKKVPDKL+D ++V H+FPITK Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITK 72 The following BLAST results are available for this feature:
BLAST of CB322136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322136 ID=CB322136; Name=CB322136; organism=Citrus sinensis; type=EST; length=305bpback to top |