CB322137

Overview
NameCB322137
Unique NameCB322137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length245
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322137 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.163e-12
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 3
Query:   12 RQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 242
            R+  AE+ T G+I+HRN+VPLL +    D  LLV EFMK GSL ++L+D  +   +L W  R +IA G   GL +LH
Sbjct:  922 REFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLH 998          
BLAST of CB322137 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.562e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3
Query:   12 RQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 242
            R+  AE+ T G+I+HRN+VPLL +    +  LLV E+MK GSL ++L+D  +   +L W AR +IA G   GL +LH
Sbjct:  927 REFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLH 1003          
BLAST of CB322137 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 3
Query:   24 AEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 242
            AEI T G+IRHR+IV LL ++   D +LL+ E+M NGSL E+L+    G   L+W  RHR+A     GL YLH
Sbjct:  736 AEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGG--HLQWETRHRVAVEAAKGLCYLH 806          
BLAST of CB322137 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.371e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3
Query:   12 RQVRAEIMTAGQIRHRNIVPLLAHMVRPDCHLLVSEFMKNGSLLEILNDVSQGRRELEWLARHRIARGIVSGLEYLH 242
            R+  AE+ T G+I+HRN+VPLL +    +  LLV E+MK GSL ++L+D  +   +L W AR +IA G   GL +LH
Sbjct:  927 REFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLH 1003          
The following BLAST results are available for this feature:
BLAST of CB322137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BRI1_ARATH5.163e-1246.75Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRI1_SOLPE2.562e-1145.45Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
CLV1_ARATH3.347e-1149.32Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
BRI1_SOLLC4.371e-1145.45Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
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Properties
Property NameValue
Genbank descriptionEST0251 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB170 similar to putative receptor-like kinase (acc# BAC07504), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322137 ID=CB322137; Name=CB322137; organism=Citrus sinensis; type=EST; length=245bp
ACATAAAAATGAGGCAAGTTCGGGCTGAGATTATGACTGCAGGTCAAATT
AGGCATAGGAATATTGTTCCTTTGCTGGCTCATATGGTCCGGCCTGACTG
CCATTTACTTGTCTCGGAATTCATGAAGAATGGAAGTTTACTAGAGATTC
TAAATGATGTCTCACAAGGAAGAAGAGAATTAGAGTGGCTAGCTAGACAC
AGGATTGCAAGAGGAATAGTTTCAGGCCTTGAGTATCTGCATATG
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