CB322151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.345e-41 Identity = 90/125 (72.00%), Postives = 93/125 (74.40%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAPESLADPLPV 377 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLKTK+IELQ GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE VLNGSSG PESL + L + Sbjct: 798 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 7.718e-40 Identity = 89/126 (70.63%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAPESLA-DPLPV 377 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF+RLK K+IELQ GYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE TVLNGSSG P A +P+PV Sbjct: 798 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.435e-38 Identity = 87/126 (69.05%), Postives = 91/126 (72.22%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAPESLADPLPVV 380 FRPEFLNRL EMIVFRQLTKLEVKEIADIMLKEVF RLK K+IELQ GYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE TVLNG+SGAP A P P++ Sbjct: 801 FRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDSA-PEPIL 925
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.585e-37 Identity = 84/129 (65.12%), Postives = 91/129 (70.54%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAP----ESLADPLPV 377 FRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E+F+RLK K++ELQ GYNPSYGARPLRRAIMRLLEDSM EKMLAREIKE TVLNG SG P E D LPV Sbjct: 745 FRPEFLNRLDEMILFRQLTKLEVKEIADILLQELFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.363e-27 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNG 335 FRPEFLNRLDE+IVFRQLTK EV+EIA++ML EVF R+K +DI+L GYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK TVL G Sbjct: 704 FRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTNEGEVTVLLG 814
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.393e-27 Identity = 60/91 (65.93%), Postives = 73/91 (80.22%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 275 FRPEFLNRLDE+IVFRQLTK EV+EIA++ML EVF R+K +DI+L GYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK Sbjct: 704 FRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.669e-26 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNRLDE+IVFRQLTK EV EIA+IMLKEVF R+ K I+L+ GYNP YGARPLRRA+MRLLED+++E+ LA +IKE Sbjct: 701 FRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIKE 792
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.847e-26 Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNR+DE+IVFRQLTK EV++IA IML+E+F+R+K + I LQ GYNPSYGARPLRRA++RLLEDS+AE++L+ +IKE Sbjct: 734 FRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKE 825
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.976e-19 Identity = 44/90 (48.89%), Postives = 65/90 (72.22%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 272 FRPEFLNR+DE+IVF LTK ++ EI +M+K++ RL+ K++ L+ GY+P YGARPLRRA+MRLLED++A++ L++ + Sbjct: 735 FRPEFLNRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCLSKPL 824
BLAST of CB322151 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.727e-18 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 3 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 278 FRPEFLNRLDE++VFR LTK ++++I +I L + RL K I L+ GY+P +GARPLRR I R LE +A+K+LA E+KE Sbjct: 740 FRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKE 831 The following BLAST results are available for this feature:
BLAST of CB322151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322151 ID=CB322151; Name=CB322151; organism=Citrus sinensis; type=EST; length=412bpback to top |