CB322156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322156 vs. ExPASy Swiss-Prot
Match: YBEG_SCHPO (Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe GN=SPBC1711.16 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 6 IFGKGLGDLYYASNQMDPYXXXXXXXXXXXXXD-MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPL--KDREKGNFMAVGSMEPAIEIWDLDVID 362 +F G Y+ + + DPY + M I P D++++ AR ED++SH+EVY+ E ++ NLYVHH ++P FPLC+ WLD + D GN++AVG+ +P IEIWDLD+ID Sbjct: 105 MFSNIRGLAYHENGEKDPYITIDPQEQDDLEREEMQILPTDSLLLAARTEDNLSHVEVYVYEPTE---ENLYVHHDFLLPTFPLCLEWLDYKVGTSDNAPGNYVAVGTFDPEIEIWDLDIID 223
BLAST of CB322156 vs. ExPASy Swiss-Prot
Match: PWP1_HUMAN (Periodic tryptophan protein 1 homolog OS=Homo sapiens GN=PWP1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = -2 Query: 6 LGDLYYASNQMDPYXXXXXXXXXXXXXDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKDREKGNFMAVGSMEPAIEIWDLDVID 347 LG Y SN DPY + I P+D +IVC R E D +LEV++ + + + YVHH I++ A+PL + WL+ P D GN++AVG+M P IE+WDLD++D Sbjct: 116 LGLTVYGSNDQDPYVTLKDTEQYEREDFL-IKPSDNLIVCGRAEQDQCNLEVHVYNQEED---SFYVHHDILLSAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVD 226
BLAST of CB322156 vs. ExPASy Swiss-Prot
Match: PWP1_BOVIN (Periodic tryptophan protein 1 homolog OS=Bos taurus GN=PWP1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = -2 Query: 6 LGDLYYASNQMDPYXXXXXXXXXXXXXDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKDREKGNFMAVGSMEPAIEIWDLDVID 347 LG Y SN DPY + I P+D +IVC R E D +LEV++ + + + YVHH I++ A+PL + WL+ P D GN++AVG+M P IE+WDLD++D Sbjct: 115 LGLTVYGSNDQDPYVTLKDTEQYEREDFL-IKPSDNLIVCGRAEQDQCNLEVHVYNQEED---SFYVHHDILLSAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVD 225
BLAST of CB322156 vs. ExPASy Swiss-Prot
Match: PWP1_MOUSE (Periodic tryptophan protein 1 homolog OS=Mus musculus GN=Pwp1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = -2 Query: 6 LGDLYYASNQMDPYXXXXXXXXXXXXXDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKDREKGNFMAVGSMEPAIEIWDLDVID 347 LG Y SN DPY + I P D +IVC R E + +LEV++ + + + YVHH I++ A+PL + WL+ P D GN++AVG+M P IE+WDLD++D Sbjct: 115 LGLTVYGSNDQDPYVTLKDTEQYEHEDFL-IKPTDNLIVCGRAEQEQCNLEVHVYNQEE---ESFYVHHDILLSAYPLSVEWLNFDPSPDASTGNYIAVGNMTPVIEVWDLDIVD 225
BLAST of CB322156 vs. ExPASy Swiss-Prot
Match: PWP1_YEAST (Periodic tryptophan protein 1 OS=Saccharomyces cerevisiae GN=PWP1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = -2 Query: 3 MTINPNDAVIVCARNEDDVSHLEVYI-------------LEESDGGDPN----------LYVHHHIIIPAFPLCMAWLDCPL--KDREKGNFMAVGSMEPAIEIWDLDVIDE 263 + + P+D +++ AR EDDVS+L++Y+ +EE D DP+ LYVHH +++PAFPLC+ WLD + E N+ A+G+ +P IEIW+LD +D+ Sbjct: 138 LQVYPSDNLVLAARTEDDVSYLDIYVYDDGAGFHSSDIPVEEGDEADPDVARGLVRDPALYVHHDLMLPAFPLCVEWLDYKVGSNSEEAANYAAIGTFDPQIEIWNLDCVDK 249 The following BLAST results are available for this feature:
BLAST of CB322156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322156 ID=CB322156; Name=CB322156; organism=Citrus sinensis; type=EST; length=672bpback to top |