CB322164

Overview
NameCB322164
Unique NameCB322164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.881e-30
Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 3
Query:    9 NGSLEKWIFV------RDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEW-RKSKISVKVDIYSFGI 341
            N SL+ WIF       R    CL W+ R ++ +DVAK L YLH DCR ++ HLD+KP+NILLDENF A V+DFGL++LI RDES V   +RGT GY+APEW  +  IS K D+YS+GI
Sbjct:  183 NSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGI 300          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.542e-24
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQAT-MRGTPGYIAPEWRKS-KISVKVDIYSFGI 341
            + NGSL   +F       LDW+ R  I L VAKGL YLH +C   V H D+KP+NILLD+ F  K++DFGL +L+ R  S    + +RGT GYIAPEW  S  I+ KVD+YS+G+
Sbjct:  609 VENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGV 723          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24
Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEWRKS-KISVKVDIYSFGI 341
            +  GSL++ +  R  +  LDW +R  II+  AKGL+YLH DC  R+ H DIK  NILLD N  A+VSDFGLA+L+E +ES +   + GT GY+APE+ +S + + K D+YSFG+
Sbjct:  382 LPGGSLDEALHERGEQ--LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGV 493          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.631e-24
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEWRKS-KISVKVDIYSFGI 341
            +  GSL++ +  R  +  LDW +R  II+  AKGL YLH DC  R+ H DIK  NILLD N  A+VSDFGLA+L+E +ES +   + GT GY+APE+ +S + + K D+YSFG+
Sbjct:  380 LPGGSLDEALHKRGEQ--LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGV 491          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 110.153 bits (274), Expect = 3.436e-24
Identity = 56/115 (48.70%), Postives = 76/115 (66.09%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCL-DWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEWRKSKISV-KVDIYSFGI 341
            M NGSL+ W+  R+  P L  W+TR +I    AKGL YLHE C   + H DIK  NILLDENFN+ ++DFGLA+L+   E+ V   + GT GYI PE+ ++ ++  K D+YSFG+
Sbjct:  810 MENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGV 924          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.487e-24
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEWRKS-KISVKVDIYSFGI 341
            MSNGS+   +     +P LDW TRKKI +  A+GL YLHE C  ++ H D+K  NILLDE F A V DFGLA+L+  ++S V   +RGT G+IAPE+  + + S K D++ FGI
Sbjct:  376 MSNGSVASRL---KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGI 486          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.487e-24
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDP--RPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEW-RKSKISVKVDIYSFGI 341
            + N  L + +F +D   R  LDW TRKKI L +AKGLT+LHE+ R ++ H DIK  N+LLD++ NAK+SDFGLA+L +   + +   + GT GY+APE+  +  ++ K D+YSFG+
Sbjct:  754 LENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGV 869          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 3
Query:    3 MSNGSLEKWIF--VRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEWR-KSKISVKVDIYSFGI 341
            + NG+LE+WI   V D  P L W  R  IIL +AKGL YLHE    +V H DIK  NILLD  +NAKVSDFGLA+L+  + S V   + GT GY+APE+     ++ K DIYSFGI
Sbjct:  230 VDNGNLEQWIHGDVGDVSP-LTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGI 344          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24
Identity = 54/114 (47.37%), Postives = 79/114 (69.30%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEWRKS-KISVKVDIYSFGI 341
            +S G+L+ +I  R  +  ++W+   KI LDVA+ L+YLHE C  +V H DIKP NILLD N+NA +SDFGL++L+   +S V   + GT GY+APE+  + ++S K D+YS+GI
Sbjct:  337 LSGGNLQDFIKERS-KAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGI 449          
BLAST of CB322164 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 3
Query:    3 MSNGSLEKWIFVRDPRPCLDWQTRKKIILDVAKGLTYLHEDCRRRVAHLDIKPQNILLDENFNAKVSDFGLAQLIERDESLVQATMRGTPGYIAPEW-RKSKISVKVDIYSFGI 341
            M NGSL   +     +  LDW+TR KI +  A+GL YLH DC  R+ H DIK  NILLDENF A +SDFG+A+ I   ++     + GT GYI PE+ R S+I+ K DIYSFGI
Sbjct:  724 MENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGI 837          
The following BLAST results are available for this feature:
BLAST of CB322164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
Y5005_ARATH1.881e-3055.08Probable receptor-like protein kinase At5g20050 OS... [more]
KPRO_MAIZE1.542e-2449.57Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
FEI1_ARATH2.014e-2449.12LRR receptor-like serine/threonine-protein kinase ... [more]
FEI2_ARATH2.631e-2449.12LRR receptor-like serine/threonine-protein kinase ... [more]
PSKR1_ARATH3.436e-2448.70Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y2239_ARATH4.487e-2449.12Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH4.487e-2446.55Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH7.654e-2452.59Probable serine/threonine-protein kinase At1g01540... [more]
RPK1_ARATH7.654e-2447.37Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH1.705e-2350.88LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionEST0282 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB202 similar to serine/threonine protein kinase (acc# AAF43399), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322164 ID=CB322164; Name=CB322164; organism=Citrus sinensis; type=EST; length=342bp
ACATGAGCAATGGCTCNTTGGAAAAATGGATTTTTGTCAGAGATCCGAGA
CCTTGTCTTGACTGGCAAACTAGGAAGAAAATAATACTTGATGTAGCCAA
AGGATTGACTTATCTTCATGAAGATTGCCGGAGAAGAGTGGCACATCTTG
ATATAAAGCCACAAAATATTCTCTTGGATGAAAATTTCAATGCCAAGGTT
TCTGATTTTGGGTTGGCTCAACTAATCGAGAGAGACGAGAGCCTAGTGCA
GGCAACAATGAGAGGAACTCCAGGATACATTGCTCCGGAATGGAGGAAAT
CAAAAATCAGTGTCAAAGTTGACATATATAGCTTCGGAATTG
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