CB322168

Overview
NameCB322168
Unique NameCB322168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length184
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5242 contig Csv1_Contig5242:553..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL44_ARATH (Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGLU44 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.298e-27
Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGN 182
            GLL ++VVKDFADYA+FC+KTFGDRVKNWMTFNEPRVVAALGYDNG FAPGRCSKAFGN
Sbjct:  172 GLLGRQVVKDFADYAEFCYKTFGDRVKNWMTFNEPRVVAALGYDNGIFAPGRCSKAFGN 230          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL01_ORYSJ (Beta-glucosidase 1 OS=Oryza sativa subsp. japonica GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.873e-22
Identity = 45/55 (81.82%), Postives = 53/55 (96.36%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            GLL++++V+ FADYA+FCFKTFGDRVKNWMTFNEPRVVAALGYD+G FAPGRC+K
Sbjct:  182 GLLNRKIVEAFADYAEFCFKTFGDRVKNWMTFNEPRVVAALGYDDGNFAPGRCTK 236          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.342e-20
Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 3
Query:    3 IGLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            +G LS  +V+ FADYADFCF+TFGDRVK+W TFNEPR VAALGYDNGF APGRCS
Sbjct:  172 LGWLSPNIVEAFADYADFCFQTFGDRVKDWFTFNEPRCVAALGYDNGFHAPGRCS 226          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 44/59 (74.58%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGN 182
            GLLSK+    F       F+TFGDRVKNWMTFNEPRVVAALGYDNG FAPGRCS+AFGN
Sbjct:  163 GLLSKQ--GRFCGLRRVLFQTFGDRVKNWMTFNEPRVVAALGYDNGIFAPGRCSEAFGN 219          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL08_ORYSJ (Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.277e-17
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS ++V  F+DYA+FCFKT+GDRVKNW TFNEPR+VAALG+D G   P RC+K
Sbjct:  178 GWLSPKIVGVFSDYAEFCFKTYGDRVKNWFTFNEPRIVAALGHDTGTDPPNRCTK 232          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL33_ARATH (Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGLU33 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.835e-16
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G L++R+V+DF ++A+FCFK FGDRVKNW TFNEP V +  GY  G  APGRCSK
Sbjct:  230 GFLNERIVEDFREFANFCFKEFGDRVKNWATFNEPSVYSVAGYSKGKKAPGRCSK 284          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.698e-15
Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS  ++ DF DYA+ CFK FGDRVKNW+TFNEP    + GY  G FAPGRCS
Sbjct:  170 GFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCS 223          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.896e-15
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G L  R+V+DF  +ADFCFKT+G +VKNW T NEPR++A  GY +GFF PGRC+
Sbjct:  159 GWLHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANHGYGDGFFPPGRCT 212          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL17_ARATH (Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGLU17 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.451e-15
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGN 182
            G L+ ++VKDF +Y D CFK FGDRVK W+T NEP + A LGY+ G  APGRCS    N
Sbjct:  171 GFLNPQIVKDFVEYVDICFKEFGDRVKEWITINEPNMFAVLGYNVGNIAPGRCSSYVQN 229          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL12_ARATH (Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGLU12 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.451e-15
Identity = 35/55 (63.64%), Postives = 37/55 (67.27%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G L   +V DF DYAD CFK FGDRVK+WMT NEP  V   GY  G  APGRCSK
Sbjct:  167 GFLGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSK 221          
The following BLAST results are available for this feature:
BLAST of CB322168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
BGL44_ARATH3.298e-2789.83Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGL... [more]
BGL01_ORYSJ1.873e-2281.82Beta-glucosidase 1 OS=Oryza sativa subsp. japonica... [more]
BGL26_ORYSJ1.342e-2078.18Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL43_ARATH4.773e-1874.58Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
BGL08_ORYSJ5.277e-1767.27Beta-glucosidase 8 OS=Oryza sativa subsp. japonica... [more]
BGL33_ARATH5.835e-1663.64Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGL... [more]
BGL12_ORYSJ1.698e-1562.96Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL38_ORYSJ2.896e-1561.11Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL17_ARATH6.451e-1557.63Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGL... [more]
BGL12_ARATH6.451e-1563.64Beta-glucosidase 12 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionEST0286 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB206 similar to beta-glucosidase (acc# AAM61427), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322168 ID=CB322168; Name=CB322168; organism=Citrus sinensis; type=EST; length=184bp
ACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGATTACGCT
GACTTTTGCTTCAAGACATTTGGAGACAGAGTAAAGAATTGGATGACATT
TAACGAACCAAGAGTGGTAGCTGCTCTTGGTTATGATAATGGTTTCTTTG
CTCCTGGGAGGTGTTCCAAAGCATTTGGAAATTG
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