CB322171

Overview
NameCB322171
Unique NameCB322171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length423
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.414e-65
Identity = 120/141 (85.11%), Postives = 132/141 (93.62%), Query Frame = 1
Query:    1 TFTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            +FTEENL+FQ+KIL+RSGLG+STYL EAVLN+PPNP MKEARKEAE VMFGAIDEL AKT+V PKDIGILIVNCSLFNPTPSLSAMV+NHYKLRGNI+SYNLGGMGCSAGLISIDLA +LL   PN+YA+VISMENITLNW
Sbjct:  130 SFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPCMKEARKEAETVMFGAIDELLAKTNVNPKDIGILIVNCSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLHSIPNTYAMVISMENITLNW 270          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.147e-61
Identity = 111/140 (79.29%), Postives = 123/140 (87.86%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            FTE+NL FQ+KILERSGLG  TY  EA+L +PPNP M+EARKEAE VMFGAID +  KT VKPKDIGIL+VNCSLFNPTPSLSAM++N YKLRGNI+SYNLGGMGCSAGLISIDLA  +LQV PNSYALV+S ENITLNW
Sbjct:  142 FTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGMGCSAGLISIDLAKQMLQVQPNSYALVVSTENITLNW 281          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 2.336e-60
Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            FTE+NL FQ+KILERSGLG  TY  EA+L +PPNP M EARKEAE VMFGAID +  KT V PKDIGIL+VNCSLFNPTPSLSAM++N YKLRGN++SYNLGGMGCSAGLISIDLA  LLQV PNSYALV+S ENITLNW
Sbjct:  136 FTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITLNW 275          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.123e-54
Identity = 98/141 (69.50%), Postives = 120/141 (85.11%), Query Frame = 1
Query:    1 TFTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            +FT++ +QFQ++I  R+GLGD TYL   + + PP  +M EAR EAEAVMFGA+D LF KT +KP ++GILIVNCSLFNPTPSLSAM++NHYK+R +I SYNLGGMGCSAGLISIDLANNLL+ +PNSYA+V+S ENITLNW
Sbjct:  152 SFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNW 292          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.505e-54
Identity = 96/140 (68.57%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            F E +L+FQ+KILERSGLG+ TYL EA+  IPP P+M  AR+E+E VMFGA+D+LF  T + P+DIG+L+VNCSLFNPTPSLSAM++N YKLRGN+ S+NLGGMGCSAG+ISIDLA ++LQVH N+YA+V+S ENIT NW
Sbjct:  139 FNESSLEFQRKILERSGLGEETYLPEALHCIPPRPTMMAAREESEQVMFGALDKLFENTKINPRDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVISIDLAKDMLQVHRNTYAVVVSTENITQNW 278          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.612e-53
Identity = 98/140 (70.00%), Postives = 119/140 (85.00%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            F +  L+FQ+KILERSGLG+ TY+ EA+  +PP  SM  AR+EAE VMFGA+D LFA T+VKPKDIGIL+VNCSLFNPTPSLSAM++N YKLRGNI SYNLGGMGCSAG+I++DLA ++L VH N+YA+V+S ENIT NW
Sbjct:  143 FDDSALEFQRKILERSGLGEDTYVPEAMHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDMLLVHRNTYAVVVSTENITQNW 282          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.162e-51
Identity = 90/140 (64.29%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            F+E +L+FQ+KIL RSGLG+ TYL +++ +IPP P+M  AR+EAE V+FGA+D LF  T + P++IG+L+VNCSLFNPTPSLSAM++N YKLRGNI S+NLGGMGCSAG+I++DLA+++LQ+H N++ALV+S ENIT NW
Sbjct:  113 FSETSLEFQRKILIRSGLGEETYLPDSIHSIPPRPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNIKSFNLGGMGCSAGVIAVDLASDMLQIHRNTFALVVSTENITQNW 252          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 4.882e-50
Identity = 90/140 (64.29%), Postives = 116/140 (82.86%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            F EE L F+K+IL+ SG+GD TY+  ++ +     +MKE R+EA  V+FGA+DELF KT VKPKD+G+L+VNCS+FNPTPSLSAMVINHYK+RGNI+SYNLGGMGCSAG+I+IDLA ++LQ +PNSYA+V+S E +  NW
Sbjct:  152 FDEETLGFKKRILQASGIGDETYVPRSISSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAMVINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNW 291          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.275e-46
Identity = 90/137 (65.69%), Postives = 112/137 (81.75%), Query Frame = 1
Query:   13 ENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW 423
            ++++FQ +ILERSGLG+ T L  A+  IPP P+M  AR EA+ V+F A+D+LF KT +KPKD+ ILIVNCSLF+PTPSLSAMVIN YKLR NI S+NL GMGCSAGLIS+DLA +LLQVHPNS A+++S E IT N+
Sbjct:  123 KSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMDAARSEAQMVIFEAMDDLFKKTGLKPKDVDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPNSNAIIVSTEIITPNY 259          
BLAST of CB322171 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.295e-46
Identity = 81/139 (58.27%), Postives = 111/139 (79.86%), Query Frame = 1
Query:    4 FTEENLQFQKKILERSGLGDSTYLXEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN 420
            +T+E +QF  +IL RSGLGD TY    +L  PP PSM EAR E+E V+FGA++ LF KT ++P+++GI IVNCSLFNP PSLS+M++N YKL+ ++ +YNL GMGCSAG IS+DLA NLL+ +PN+YA+++S EN+TL+
Sbjct:   91 YTDETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLS 229          
The following BLAST results are available for this feature:
BLAST of CB322171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS11_ARATH1.414e-6585.113-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS19_ARATH6.147e-6179.293-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS17_ARATH2.336e-6078.573-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS1_ARATH1.123e-5469.503-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH9.505e-5468.573-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS4_ARATH3.612e-5370.003-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS2_ARATH1.162e-5164.29Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis ... [more]
KCS10_ARATH4.882e-5064.293-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana... [more]
KCS6_ARATH3.275e-4665.693-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana ... [more]
KCS13_ARATH7.295e-4658.273-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionEST0289 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB211 similar to beta-ketoacyl-CoA synthase (acc# AAO41904), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322171 ID=CB322171; Name=CB322171; organism=Citrus sinensis; type=EST; length=423bp
ACATTTACAGAGGAAAATCTTCAGTTTCAGAAGAAGATCCTAGAGCGATC
TGGACTTGGTGATTCAACTTACCTTNCAGAGGCTGTGCTCAACATTCCTC
CAAACCCATCAATGAAAGAAGCTAGAAAAGAAGCTGAGGCTGTGATGTTT
GGTGCCATTGATGAGCTTTTTGCAAAAACCTCTGTGAAACCCAAGGACAT
TGGTATCTTGATTGTGAATTGTAGCTTGTTCAATCCAACGCCATCTCTGT
CTGCCATGGTCATCAACCATTACAAGCTTCGAGGGAATATAATTAGCTAC
AATTTGGGAGGGATGGGCTGCAGTGCAGGTTTGATTTCAATTGATCTTGC
AAACAATCTTCTTCAGGTTCATCCCAACTCTTATGCATTGGTTATTAGCA
TGGAGAACATCACATTGAATTGG
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