CB322179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_ARATH (Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana GN=DAPF PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.981e-40 Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = -3 Query: 79 KEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 423 K G NLKVD LNL EIGPKFEHH +FPARTNTEFVE++S S LKMRVWER VLEG A+R+CTVDLPGGPL+IEWK+EDNH+YMTGPAE VFYGS LL Sbjct: 248 KGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_ORYSJ (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.844e-36 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = -3 Query: 82 KEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVL 423 KE + L VD L L++IGPKFEHH +FPARTNTEFVE++S S LKMRVWER VLEG AER+C VDLPGGPL+IEW+E+DNH+YMTGPAE VFYGS + Sbjct: 240 KELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGSAV 353
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_ORYSI (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica GN=DAPF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.844e-36 Identity = 71/114 (62.28%), Postives = 83/114 (72.81%), Query Frame = -3 Query: 82 KEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVL 423 KE + L VD L L++IGPKFEHH +FPARTNTEFVE++S S LKMRVWER VLEG AER+C VDLPGGPL+IEW+E+DNH+YMTGPAE VFYGS + Sbjct: 243 KELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGSAV 356
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_SYNY3 (Diaminopimelate epimerase OS=Synechocystis sp. (strain PCC 6803) GN=dapF PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25 Identity = 55/104 (52.88%), Postives = 66/104 (63.46%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 VD LNL EIGP FEHH F RTNTEF++++ +LKMRVWER VL G +RRCTV+LPGG L+IEW +DN +YMTGPA+ VF G Sbjct: 172 VDSLNLTEIGPLFEHHPQFSQRTNTEFIQVLGSDRLKMRVWERGAGITLACGTGACATVVAAVLTGRGDRRCTVELPGGNLEIEWSAQDNRLYMTGPAQRVFSG 275
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP6 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25 Identity = 58/103 (56.31%), Postives = 68/103 (66.02%), Query Frame = -3 Query: 79 LAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 387 LAEIGP FEHH VFP RTNTEFVE++ P LKMRVWER VL G ++R+ TV+LPGGPL IEW+ ED H++MTGPA VF GS+ L Sbjct: 177 LAEIGPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACATLVAAVLTGRSDRQATVELPGGPLQIEWR-EDGHLFMTGPAVKVFSGSMEL 278
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_SYNE7 (Diaminopimelate epimerase OS=Synechococcus elongatus (strain PCC 7942) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25 Identity = 58/103 (56.31%), Postives = 68/103 (66.02%), Query Frame = -3 Query: 79 LAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 387 LAEIGP FEHH VFP RTNTEFVE++ P LKMRVWER VL G ++R+ TV+LPGGPL IEW+ ED H++MTGPA VF GS+ L Sbjct: 177 LAEIGPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACATLVAAVLTGRSDRQATVELPGGPLQIEWR-EDGHLFMTGPAVKVFSGSMEL 278
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_MICAN (Diaminopimelate epimerase OS=Microcystis aeruginosa (strain NIES-843) GN=dapF PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.186e-25 Identity = 54/99 (54.55%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 91 LAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 387 L IGPKFEHH VFP RTN EFVE+I+P +KMRVWER +L G +RRCTV+LPGG L I W + DN VYMTGPA+ VF G Sbjct: 179 LETIGPKFEHHPVFPQRTNVEFVEVIAPDYMKMRVWERGAGITLACGTGACAVVVAALLTGKCDRRCTVELPGGCLQIHWSQTDNRVYMTGPAKAVFEG 277
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP7 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 7424) GN=dapF PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.099e-25 Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 V + L IGP+FEHH FP RTNTEF+E++ P LKMRVWER VL G ++RRCTV+LPGG L I W E D HVYMTGPA+ VF G Sbjct: 174 VKSIALETIGPQFEHHVAFPQRTNTEFIEVLRPDYLKMRVWERGAGITLACGTGACASVVAGVLTGKSDRRCTVELPGGCLSIYWSETDGHVYMTGPAKRVFTG 277
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP2 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dapF PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.523e-24 Identity = 53/108 (49.07%), Postives = 62/108 (57.41%), Query Frame = -3 Query: 79 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 402 V + L IG FEHH FP R NTEF+E++ P +KMRVWER VL GH +R CTV+LPGG L IEW DNH+YMTGPA + F G V L Sbjct: 174 VAAIALEVIGKDFEHHPAFPQRINTEFIEVVRPDYIKMRVWERGAGITLACGTGACASVVAGVLTGHCDRLCTVELPGGCLQIEWSAADNHIYMTGPAAISFQGQVTL 281
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF2_ANASP (Diaminopimelate epimerase 2 OS=Anabaena sp. (strain PCC 7120) GN=dapF2 PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.848e-24 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 V + L IGPKFEHH FP RTNTEF++++S LKMRVWER VL G ++R TV+LPGGPL+IEW E D +YMTGPA+ VF G + Sbjct: 174 VAAIPLEIIGPKFEHHPAFPQRTNTEFIQVVSRDYLKMRVWERGAGITLACGTGACASLVAAVLTGRSDRLATVELPGGPLEIEWSEVDQRIYMTGPADRVFTGKL 279 The following BLAST results are available for this feature:
BLAST of CB322179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322179 ID=CB322179; Name=CB322179; organism=Citrus sinensis; type=EST; length=425bpback to top |