CB322180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 78/141 (55.32%), Postives = 88/141 (62.41%), Query Frame = 3 Query: 60 NTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAKKPTQSXXXXXXXXXXXXXXXXXXXXXXXXVEDAGXXXXXXXXXXXXXXXXXXSKMILDEWKRL 482 NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI+TKSFTSEFPHVERYFWTMVN PNF+K+LG++KQAESVPPVQ P + E+ SKMILDEWKRL Sbjct: 142 NTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKKAPPPKEQKPKEAKKEAPKEAPKPKAVEKPEEEEEA----PKPKPKNPLDLLPPSKMILDEWKRL 278
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.842e-34 Identity = 81/160 (50.62%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 3 LPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAKKPTQSXXXXXXXXXXXXXXXXXXXXXXXXVEDAGXXXXXXXXXXXXXXXXXXSKMILDEWKRL 482 +P EE NTHLASNTYLVGHSVTLADI+MTCNL GF RIL KSFTSEFPHVERYFWTMVN PNF+K++G+ KQAESVPPVQ P + VE + SKMILDEWKRL Sbjct: 123 VPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAESVPPVQKKAAPPKE------SKAKEAKKEAPKEAPKPKVEASEEEEAPKPKPKNPLDLLPPSKMILDEWKRL 276
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.405e-34 Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 3 LPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAKKPTQ 305 LP AEE NTHLASNTYLVGH VTLADII+TCNL GF++++ KSFTSEFPHVERYFWT+VN P F+K+LG++KQ ESVPPV SAKKP+Q Sbjct: 123 LPPAEEAAISALKRALGALNTHLASNTYLVGHFVTLADIIVTCNLFFGFTKLMIKSFTSEFPHVERYFWTLVNQPKFKKVLGDVKQTESVPPVPSAKKPSQ 223
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.194e-33 Identity = 76/142 (53.52%), Postives = 89/142 (62.68%), Query Frame = 3 Query: 60 NTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQ-SAKKPTQSXXXXXXXXXXXXXXXXXXXXXXXXVEDAGXXXXXXXXXXXXXXXXXXSKMILDEWKRL 482 NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI+TK+FTSEFPHVERYFWTMVN PNF+K++G++KQA+SVP VQ A P + E+A SKMILDEWKRL Sbjct: 142 NTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMGDVKQADSVPQVQKKAAAPKEQKPKEAKKEAPKEAPKPKAAEKPEEEEEA-----PKPKPKNPLDLLPPSKMILDEWKRL 278
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.752e-30 Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 12 AEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 293 AEE NTHL SNTYLVGHS+TLADII CNL LGF+ ++TK FTSEFPHVERYFWT+VN PNF K+LG++KQ E+VPP+ S K Sbjct: 126 AEEGAISTLKRALDALNTHLTSNTYLVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHVERYFWTVVNQPNFTKVLGDVKQTEAVPPIASKK 219
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.366e-29 Identity = 60/96 (62.50%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 12 AEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAKKP 299 AEE NTHLASNT+LVGHSVTLADI+ CNL LGF+ ++TK FTS FPHVERYFWTMVN P F+K+LG+ KQ E+VPPV + K P Sbjct: 126 AEEAAISALKRGLEALNTHLASNTFLVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYFWTMVNQPEFKKVLGDAKQTEAVPPVPTKKAP 221
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 60 NTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 293 +THL + T+LVG VTLADI + C L + ++L SF FP+ R+F T +N P FR ILGE+K E + + K Sbjct: 143 DTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLCEKMAQFDAKK 220
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 60 NTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 293 +THL + T+LVG VTLADI + C L + ++L SF FP+ R+F T +N P FR ILGE+K E + + K Sbjct: 143 DTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLCEKMAQFDAKK 220
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 9.833e-12 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 3 Query: 60 NTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 293 + HL + T+LVG VTLADI + C L + ++L SF FP+ R+F T +N P FR +LGE+K E + + K Sbjct: 143 DAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 220
BLAST of CB322180 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 9.833e-12 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 3 Query: 60 NTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 293 + HL + T+LVG VTLADI + C L + ++L SF FP+ R+F T +N P FR +LGE+K E + + K Sbjct: 138 DAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 215 The following BLAST results are available for this feature:
BLAST of CB322180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322180 ID=CB322180; Name=CB322180; organism=Citrus sinensis; type=EST; length=482bpback to top |