CB322193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.792e-43 Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 1 Query: 1 GTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 255 GTCSIDTTCTIWDIEK VVETQLIAHDKEV+DI WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR Sbjct: 149 GTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 233
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.445e-35 Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 1 GTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 255 GT SIDTTCTIWDIE+ VV+TQLIAHDKEVYDI WG VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD R Sbjct: 152 GTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPR 236
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.582e-35 Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 1 Query: 1 GTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 255 GT S DTTCTIWDIE+ V+TQLIAHDKEV+DI WG VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD R Sbjct: 152 GTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 236
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 7.113e-25 Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = 1 Query: 4 TCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 249 T SIDTTCTIW+IE G +TQLIAHDKEV+DI + +FASV ADGS+R+FDLR+ EHSTIIYE+P PLLRL WNKQD Sbjct: 135 TSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQD 216
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.611e-24 Identity = 62/98 (63.27%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 1 GTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEAR----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 249 GT SIDTTCTIW +E G V +TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Sbjct: 137 GTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQD 233
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.611e-24 Identity = 62/98 (63.27%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 1 GTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEAR----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 249 GT SIDTTCTIW +E G V +TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Sbjct: 137 GTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQD 233
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.437e-17 Identity = 49/92 (53.26%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 10 SIDTTCTIWDIEKGVVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYE---------------SPQPDTPLLRLA 234 S+DTTCT+WDI +TQLIAHDKEVYD+ + VF SV ADGSVR+FDLR +HSTIIYE SP PLLRL+ Sbjct: 186 SLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASPPVSAPLLRLS 277
BLAST of CB322193 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.138e-14 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 10 SIDTTCTIWDIEKG-VVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYESP 204 SIDTTC +WD++ V+TQLIAHD EV+D+ + ++FAS DGSVR+FDLR HSTIIYE P Sbjct: 263 SIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPP 330 The following BLAST results are available for this feature:
BLAST of CB322193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322193 ID=CB322193; Name=CB322193; organism=Citrus sinensis; type=EST; length=255bpback to top |