CB322214

Overview
NameCB322214
Unique NameCB322214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length246
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5242 contig Csv1_Contig5242:979..1224. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 2.725e-29
Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLK-QPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYN 245
            P T+QNIV  RLPKFT+EEVKMVKGSIDFVGINQYT Y+M DP +   PK +GYQQDWN  F + KNG PIGPRA+S WLYN
Sbjct:  302 PNTLQNIVKERLPKFTEEEVKMVKGSIDFVGINQYTTYFMSDPKISTTPKDLGYQQDWNVTFNFAKNGTPIGPRAHSEWLYN 383          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL44_ARATH (Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGLU44 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.559e-29
Identity = 60/82 (73.17%), Postives = 66/82 (80.49%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPH-LKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLYN 245
            PKTMQNIV  RLPKFT++EVKMVKGSIDFVGINQYT YYM +PH   +PK +GYQQDWN  F + K G PIGPRA S WLYN
Sbjct:  313 PKTMQNIVKERLPKFTEKEVKMVKGSIDFVGINQYTTYYMSEPHPTTKPKDLGYQQDWNVEFGFAKLGKPIGPRAYSSWLYN 394          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL01_ORYSJ (Beta-glucosidase 1 OS=Oryza sativa subsp. japonica GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22
Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            PK++Q IV  RLPKFT +EV MVKGSID+VGINQYTAYY+ D          Y  DW+A   YE++GVPIGPRANS WLY
Sbjct:  319 PKSLQVIVKERLPKFTADEVHMVKGSIDYVGINQYTAYYVRDQQPNATTLPSYSSDWHAAPIYERDGVPIGPRANSDWLY 398          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.226e-22
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P +M  IV +R+P F+ EE +MVK SID+VGIN YT++YM DP         YQ DW+ GFAYE+NGVPIG +ANSYWLY
Sbjct:  311 PYSMLEIVKDRMPTFSDEESRMVKDSIDYVGINHYTSFYMKDPGPWNLTPTSYQDDWHVGFAYERNGVPIGAQANSYWLY 390          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.356e-20
Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P+ MQ++V +RLPKFT E+ ++VKGS D++GINQYTA YM    L Q     Y  DW   + + KNG PIGP+ANS WLY
Sbjct:  309 PQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLY 388          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL08_ORYSJ (Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.770e-20
Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            PK M++IV  RLP FT E+ K+VKGS D+ GINQYTA YM D    Q     Y  DW+  F +++NGVPIG +ANS WLY
Sbjct:  316 PKNMRDIVKERLPTFTPEQAKLVKGSADYFGINQYTANYMADQPAPQQAATSYSSDWHVSFIFQRNGVPIGQQANSNWLY 395          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.821e-18
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P+TMQN V  RLP FT+E+ +M+KGS D++ IN YT YY+   H      + Y  DW+   +YE+NGVPIG +A S WLY
Sbjct:  297 PETMQNAVKERLPNFTREQSEMIKGSADYIAINHYTTYYV--SHHVNKTSISYLNDWDVKISYERNGVPIGKQAYSNWLY 374          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL17_ARATH (Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGLU17 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.697e-16
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            PKTM+ +VGNRLPKFTK++ KMV+GS DF G+N YT+ Y+ D        + Y  D       EKNGVP+G   ++ WL+
Sbjct:  312 PKTMRELVGNRLPKFTKKQSKMVRGSFDFFGLNYYTSRYVEDVMFYANTNLSYTTDSRVNQTTEKNGVPVGEPTSADWLF 391          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.820e-15
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P +M+ +VGNRLP+FTKE+ K+VKG+ DF+G+N YTA Y  +          Y  D  A     +NG+PIGP+A S WLY
Sbjct:  312 PLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLY 391          
BLAST of CB322214 vs. ExPASy Swiss-Prot
Match: BGL24_ORYSJ (Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 3
Query:    3 PKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYQQDWNAGFAYEKNGVPIGPRANSYWLY 242
            P +M+ +VGNRLP+FTKE+ K + GS DF+G+N YTA Y+            Y  D       E+NG  IGP+A S WLY
Sbjct:  306 PVSMRTLVGNRLPRFTKEQSKAINGSFDFIGLNYYTARYIQGTKQDSNSHKSYSTDSLTNERVERNGTDIGPKAGSSWLY 385          
The following BLAST results are available for this feature:
BLAST of CB322214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
BGL43_ARATH2.725e-2971.95Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
BGL44_ARATH3.559e-2973.17Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGL... [more]
BGL01_ORYSJ1.109e-2262.50Beta-glucosidase 1 OS=Oryza sativa subsp. japonica... [more]
BGL26_ORYSJ3.226e-2258.75Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL07_ORYSJ1.356e-2053.75Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL08_ORYSJ1.770e-2055.00Beta-glucosidase 8 OS=Oryza sativa subsp. japonica... [more]
BGL38_ORYSJ4.821e-1850.00Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL17_ARATH7.697e-1647.50Beta-glucosidase 17 OS=Arabidopsis thaliana GN=BGL... [more]
BGL12_ORYSJ3.820e-1547.50Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL24_ORYSJ1.452e-1445.00Beta-glucosidase 24 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionEST0338 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB354 similar to beta-mannosidase (acc# AAL37719), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322214 ID=CB322214; Name=CB322214; organism=Citrus sinensis; type=EST; length=246bp
ACCCAAAAACAATGCAAAACATTGTTGGCAACAGGCTACCCAAGTTCACA
AAAGAAGAGGTTAAAATGGTAAAGGGATCAATAGATTTTGTGGGTATTAA
CCAGTATACTGCCTACTACATGTATGATCCGCATTTGAAACAACCAAAGC
AAGTGGGATATCAGCAGGATTGGAATGCTGGATTTGCTTATGAAAAGAAT
GGAGTGCCAATTGGTCCAAGAGCAAATTCTTATTGGCTATACAATG
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