CB417294

Overview
NameCB417294
Unique NameCB417294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417294 vs. ExPASy Swiss-Prot
Match: IP5P1_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 96/247 (38.87%), Postives = 130/247 (52.63%), Query Frame = 3
Query:    3 EDIPDIEEEITHESDSDVGEEVYPLDDENNGFDEVNDKPV---KMFTNYEVSACADSAKPDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLMTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKCKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFV 734
            E++P   E++  E+  D  + +  +D++ N   E  D P+      TN +V    +     +P +  LQR FS+P   DR   +++       E              S +ER+GLSWPEPPL L+ Q V ER  S K+V    T+                                   R+ SYVR+VSKQMVG+FLTIWVRR+LR+HI N+ VSTVGVG+MG+IGNKGSVSVSMSI+QT FCF+
Sbjct:  199 EEVPYSVEDMFVETSHDACDGISSMDNKLNSV-ESTDVPIVSEDSLTNIDVLGSTNDNASCLPIQEYLQRQFSTPNTPDRSLSMQINSDSKREER------------FSYTERVGLSWPEPPLRLLNQYVSERRGSFKSVNLTITN----------------------------------LRKPSYVRIVSKQMVGVFLTIWVRRNLRKHISNLCVSTVGVGIMGYIGNKGSVSVSMSIYQTPFCFL 398          
BLAST of CB417294 vs. ExPASy Swiss-Prot
Match: IP5P2_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = 3
Query:  297 GRLTKMLSGSERIGLSWPEPPLNLMTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSS------ELALLAEID---------------------------IETLMKCKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFV 734
            G+L ++ S +  +G   PE P      +       LK  +SF+T N    ++  K  +D+ SS      E A +   D                           +E   K K    YVR+VSKQMVGI++++W+RR LRRH+ N++VS VGVG+MG++GNKGSVS+SM+++Q+  CFV
Sbjct:  276 GKLRRVFSSNATLGFKLPENPSG--ASRFASEARQLKRSRSFETLNL--SWNDIKEEIDNRSSSSSEAEEAAKIMHDDSSDGDSSSQDEEDGDKIRNSYGLPEDLVEECRKVKDSQKYVRIVSKQMVGIYVSVWIRRRLRRHVNNLKVSPVGVGLMGYMGNKGSVSISMTLYQSRMCFV 450          
BLAST of CB417294 vs. ExPASy Swiss-Prot
Match: IP5P3_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.551e-18
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 3
Query:  543 SSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFV 734
            S Y  + SKQMVG+FLTIWV+  LR H++N++VS VG G+MG++GNKGS+S+SM +HQT FCFV
Sbjct:  347 SQYCLVASKQMVGVFLTIWVKSELREHVKNMKVSCVGRGLMGYLGNKGSISISMLLHQTSFCFV 410          
The following BLAST results are available for this feature:
BLAST of CB417294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
IP5P1_ARATH2.813e-3638.87Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
IP5P2_ARATH3.019e-2235.20Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
IP5P3_ARATH1.551e-1862.50Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
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Properties
Property NameValue
Genbank descriptionEST0367 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P012 similar to inositol polyphosphate phosphatase (acc# D96739), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417294 ID=CB417294; Name=CB417294; organism=Citrus sinensis; type=EST; length=736bp
CCGAGGATATTCCAGATATAGAAGAGGAGATAACCCATGAAAGTGATAGT
GATGTAGGTGAGGAAGTTTATCCGCTGGATGATGAAAATAACGGTTTCGA
TGAAGTCAATGATAAACCAGTCAAGATGTTCACGAATTATGAAGTTTCAG
CCTGTGCTGATAGTGCCAAACCAGACATGCCAGCAGAAAATAATTTACAA
AGGCATTTTTCTTCTCCAAAGAGGTTTGATAGGTTATATTGCCTCCGAAT
GGAAGAGAGTAAGGGAAATGTTGAAGCACCAGCTGTGCAATACAATGGCC
GATTAACTAAAATGCTTAGTGGGTCAGAAAGGATTGGTTTGAGCTGGCCA
GAGCCTCCATTAAACTTGATGACTCAGAAAGTTTTGGAGAGACCAAATTC
CTTGAAGACAGTTAAATCTTTCAAAACATCCAATTCTTTTAGGAGATATA
GTTCTTTCAAGCCAGCTGTCGATGATATGTCATCAGAGCTTGCATTGCTT
GCAGAAATTGACATTGAAACTCTCATGAAATGCAAAAGAAGGTCATCATA
TGTAAGGATGGTAAGTAAGCAAATGGTTGGTATTTTCCTTACAATATGGG
TTCGGAGAAGCTTACGCAGGCATATTCAGAATGTGAGGGTGTCTACTGTT
GGTGTTGGTGTGATGGGCTTCATTGGTAACAAGGGATCTGTTTCAGTTAG
CATGTCAATTCATCAGACACTATTTTGTTTTGTTGG
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