CB417326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: SK2L2_MOUSE (Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.632e-48 Identity = 86/109 (78.90%), Postives = 99/109 (90.83%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 YRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP + VFLSAT+ NA QFAEWICHLHKQPCHV+ Sbjct: 197 YREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVI 305
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: SK2L2_HUMAN (Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2 PE=1 SV=3) HSP 1 Score: 190.274 bits (482), Expect = 2.632e-48 Identity = 86/109 (78.90%), Postives = 99/109 (90.83%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 YRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP + VFLSAT+ NA QFAEWICHLHKQPCHV+ Sbjct: 199 YREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVI 307
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: MTR4_YEAST (ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae GN=MTR4 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.724e-45 Identity = 80/109 (73.39%), Postives = 96/109 (88.07%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 YREL EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II LP ++ VFLSAT+ NA +FAEWIC +H QPCH+V Sbjct: 209 YRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIV 317
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: YDVG_SCHPO (Uncharacterized helicase C6F12.16c OS=Schizosaccharomyces pombe GN=SPAC6F12.16c PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 2.306e-44 Identity = 83/109 (76.15%), Postives = 95/109 (87.16%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 YREL EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D+ERGVVWEE+II LP VFLSAT+ NA QFAEWI +H+QPCHVV Sbjct: 258 YRELLAEFGDVGLMTGDVTINPDATCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERGVVWEETIILLPDKSHFVFLSATIPNAMQFAEWITKIHRQPCHVV 366
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: YE02_SCHPO (Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.952e-43 Identity = 76/109 (69.72%), Postives = 95/109 (87.16%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 YREL EF DVGLMTGDV+++P+ASCL+MTTEILR MLY+ SE++ E+AWVIFDE+HYM+D++RGVVWEE++I LP AI+ +FLSAT+ NA QFA WI +HKQPCHVV Sbjct: 185 YRELLSEFGDVGLMTGDVSINPSASCLIMTTEILRAMLYKNSEIMHEIAWVIFDEVHYMRDKDRGVVWEETLILLPDAIRFIFLSATLPNALQFARWISEIHKQPCHVV 293
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: MTR4_CAEEL (mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.280e-42 Identity = 77/109 (70.64%), Postives = 94/109 (86.24%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 YREL +EFKDVGLMTGDVTL+P+ASCLVMTTEILR MLYRGSE++KEV WV++DEIHYM+D+ERGVVWEE+II + IK FLSAT+ NA QFA+W+ + +QP +VV Sbjct: 185 YRELEEEFKDVGLMTGDVTLNPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETIILMSKNIKQAFLSATIPNARQFAQWVASIKQQPVNVV 293
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: SKIV2_HUMAN (Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.550e-32 Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 +R+ F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+HY+ D ERGVVWEE +I LP + ++ LSAT+ NA +FA+WI L ++ +V+ Sbjct: 370 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVI 478
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: YJV3_SCHPO (Uncharacterized helicase C550.03c OS=Schizosaccharomyces pombe GN=SPCC550.03c PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.924e-31 Identity = 57/109 (52.29%), Postives = 84/109 (77.06%), Query Frame = 3 Query: 63 YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 +R+ +F+DVG++TGDV ++P SCL+MTTEILR MLYRG++++++V +VIFDE+HY+ D ERGVVWEE II LPP + ++ LSAT+ N +FA W+ K+ +V+ Sbjct: 340 FRDFKHKFEDVGILTGDVQVNPEGSCLLMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIMLPPHVTLILLSATVPNTKEFASWVGRTKKKNIYVI 448
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae GN=SKI2 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.737e-29 Identity = 57/111 (51.35%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 63 YRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 389 +R+ + F DV GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VIFDE+HY+ D++RGVVWEE II LP +K + LSAT+ N +FA WI ++ +V+ Sbjct: 389 FRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVI 499
BLAST of CB417326 vs. ExPASy Swiss-Prot
Match: HELY_MYCTU (Probable helicase helY OS=Mycobacterium tuberculosis GN=helY PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.583e-21 Identity = 45/88 (51.14%), Postives = 67/88 (76.14%), Query Frame = 3 Query: 93 VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 356 +GL+TGD++++ NA +VMTTE+LR MLY S L+ +++V+ DE+H++ DR RG VWEE I+ LP +++V LSAT+SNA +F WI Sbjct: 89 IGLLTGDLSVNGNAPVVVMTTEVLRNMLYADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWI 176 The following BLAST results are available for this feature:
BLAST of CB417326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417326 ID=CB417326; Name=CB417326; organism=Citrus sinensis; type=EST; length=389bpback to top |