CB417328

Overview
NameCB417328
Unique NameCB417328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5269 contig Csv1_Contig5269:212..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.216e-63
Identity = 114/131 (87.02%), Postives = 124/131 (94.66%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            K+EGHDT++LAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA++ GLTGHERYTIDLP +VSEIRPGQD+ V TD+GKSFTC +RFDTEVELAYF+HGGIL YVIRNL
Sbjct:  765 KSEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERYTIDLPTNVSEIRPGQDITVTTDNGKSFTCTLRFDTEVELAYFNHGGILPYVIRNL 895          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.227e-62
Identity = 114/133 (85.71%), Postives = 126/133 (94.74%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN 401
            K+EG DT+ILAGAEYG GSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA++ GLTGHER+TIDLP++V EIRPGQDV V TD+GKSF+C++RFDTEVELAYFDHGGILQYVIRNLI+
Sbjct:  629 KSEGQDTIILAGAEYGIGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFTIDLPSNVGEIRPGQDVAVVTDTGKSFSCILRFDTEVELAYFDHGGILQYVIRNLIH 761          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.092e-62
Identity = 115/132 (87.12%), Postives = 124/132 (93.94%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 398
            +NEG DT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK GEDAET GLTG E YTI+LPN+VSEI+PGQDV V T++GKSFTC +RFDTEVELAYFDHGGILQYVIRNLI
Sbjct:  765 RNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 896          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.946e-61
Identity = 112/132 (84.85%), Postives = 123/132 (93.18%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 398
            K+ G DT++LAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA++ GLTGHERYTIDLP+ +S+IRPGQDV V TDSGKSFTC +RFDTEVELAYF++GGIL YVIRNLI
Sbjct:  765 KSAGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADSLGLTGHERYTIDLPDDISKIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFNNGGILPYVIRNLI 896          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_SOLTU (Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.148e-60
Identity = 111/131 (84.73%), Postives = 121/131 (92.37%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            K+ G  T+ILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGI+PLCFK GEDA+T GLTG ERYTIDLP ++SEIRPGQDV V TD+GKSFTC++RFDTEVELAYF+HGGILQYVIR L
Sbjct:  483 KSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCIVRFDTEVELAYFNHGGILQYVIRQL 613          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.148e-60
Identity = 112/131 (85.50%), Postives = 119/131 (90.84%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            K+ G DT+ILAGAEYGSGSSRDWAAKGPML GVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA+T GLTGHERYTI LP  +SEIRPGQDV V TD+GKSFTC +RFDTEVELAYF+HGGIL YVIRNL
Sbjct:  857 KSSGEDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIHLPTDISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFNHGGILPYVIRNL 987          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.075e-58
Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            K    DT+ILAGAEYGSGSSRDWAAKGP+LLGVKAVIAKSFERIHRSNL GMGIIPLCFK GEDAET GLTGHERYT+ LP  VS+IRPGQDV V TDSGKSF C +RFDTEVELAY+DHGGIL YVIR+L
Sbjct:  862 KTAEQDTIILAGAEYGSGSSRDWAAKGPLLLGVKAVIAKSFERIHRSNLAGMGIIPLCFKAGEDAETLGLTGHERYTVHLPTKVSDIRPGQDVTVTTDSGKSFVCTLRFDTEVELAYYDHGGILPYVIRSL 992          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.846e-43
Identity = 81/131 (61.83%), Postives = 105/131 (80.15%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            K  GH  ++LAG EYG+GSSRDWAAKGP LLGVKAV+A+S+ERIHRSNLVGMG+IPL + PGEDA T GLTG ERYTI +P +   ++P  ++++  D+GK+F  ++RFDT+VEL YF +GGIL Y+IR +
Sbjct:  760 KQAGHPLIVLAGKEYGAGSSRDWAAKGPFLLGVKAVLAESYERIHRSNLVGMGVIPLQYLPGEDARTLGLTGRERYTIIIPEN---LKPQMNIQIKLDTGKTFHAIMRFDTDVELTYFHNGGILNYMIRKM 887          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_DICDI (Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.080e-42
Identity = 81/133 (60.90%), Postives = 106/133 (79.70%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN 401
            ++EGH  ++LAG++YGSGSSRDWAAKGP L G+K VIA SFERIHRSNLVGMGIIPL F+PG++A T GLTG E++ I+LP   S I+ GQ V+V T+ GKSF  ++RFDT +E+ Y+ + GIL YV+R L++
Sbjct:  762 QSEGHQLIVLAGSDYGSGSSRDWAAKGPYLQGIKCVIAISFERIHRSNLVGMGIIPLQFQPGQNASTLGLTGKEQFNIELPTDKSLIKTGQTVKVTTNCGKSFETILRFDTPIEVEYWANNGILSYVLRKLLH 894          
BLAST of CB417328 vs. ExPASy Swiss-Prot
Match: ACOC_RABIT (Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.141e-42
Identity = 82/131 (62.60%), Postives = 105/131 (80.15%), Query Frame = 3
Query:    3 KNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVATDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 395
            + EGH  ++LAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE+A++ GLTG ERYTI +P +++   P   V+V  D+GK+F  VIRFDT+VEL Y  +GGIL Y+IR +
Sbjct:  760 QQEGHPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADSLGLTGRERYTIIIPENLT---PRMHVQVKLDTGKTFQAVIRFDTDVELTYLHNGGILNYMIRKM 887          
The following BLAST results are available for this feature:
BLAST of CB417328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
ACOC_ORYSJ4.216e-6387.02Putative aconitate hydratase, cytoplasmic OS=Oryza... [more]
ACOC_CUCMC1.227e-6285.71Aconitate hydratase (Fragment) OS=Cucumis melo var... [more]
ACO1_ARATH2.092e-6287.12Aconitate hydratase 1 OS=Arabidopsis thaliana GN=A... [more]
ACOC_CUCMA3.946e-6184.85Aconitate hydratase, cytoplasmic OS=Cucurbita maxi... [more]
ACOC_SOLTU1.148e-6084.73Aconitate hydratase, cytoplasmic (Fragment) OS=Sol... [more]
ACO2M_ARATH1.148e-6085.50Aconitate hydratase 2, mitochondrial OS=Arabidopsi... [more]
ACO3M_ARATH1.075e-5883.21Aconitate hydratase 3, mitochondrial OS=Arabidopsi... [more]
ACOC_CHICK4.846e-4361.83Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]
ACOC_DICDI1.080e-4260.90Probable cytoplasmic aconitate hydratase OS=Dictyo... [more]
ACOC_RABIT3.141e-4262.60Cytoplasmic aconitate hydratase OS=Oryctolagus cun... [more]

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Properties
Property NameValue
Genbank descriptionEST0405 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P075 similar to aconitase (acc# AAC26045), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417328 ID=CB417328; Name=CB417328; organism=Citrus sinensis; type=EST; length=607bp
ACAAGAATGAGGGGCACGATACTGTTATTTTAGCTGGTGCTGAGTATGGC
AGTGGAAGTTCTCGTGATTGGGCTGCTAAGGGTCCAATGTTGCTGGGTGT
GAAAGCGGTGATTGCAAAAAGCTTTGAGCGAATTCACCGTAGTAATTTGG
TGGGTATGGGCATAATCCCGTTGTGTTTCAAGCCTGGTGAGGATGCCGAG
ACTCATGGGTTGACTGGCCATGAACGCTACACCATTGACCTTCCAAACAG
TGTGAGTGAAATTAGACCTGGTCAGGATGTCAGAGTGGCCACAGACAGTG
GCAAGTCATTCACATGCGTTATAAGATTTGATACAGAGGTGGAATTGGCT
TACTTTGATCATGGAGGCATACTGCAATATGTCATAAGAAACTTGATCAA
TGTGAGACAATGATTCCGCAAGAACCAACTGGTGCTCTTCAACCGGGGTC
TACTTCTTCATTGCTTTAACGCTTTAGCAGATTCAGCCGACGTCCATGAA
TAAATTACGGAACTAAGTTTAGAAATTTCTGTTTTTTGCAGTCATTTTGA
ATTACATTTTTATATCGAGAGCTTTGATAAACAATAGGACACGCCCTAGA
CATGAAT
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