CB417338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIRL_SOLLC (Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 8.047e-53 Identity = 97/141 (68.79%), Postives = 116/141 (82.27%), Query Frame = 2 Query: 2 QNGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQ 424 Q GLQLWINLSS DKMIEPRYQE+ ++I +AE DGV V I+AGESMG +S V+TRTPTM+LDFTLKP ++ HQ IPETWNAF+Y +EGEG FG+ +S+ AH+ LVL G+GLS WN+SSK LRFVLI GQP+NEPVVQ Sbjct: 116 QKGLQLWINLSSKDKMIEPRYQELLHQDIPKAEKDGVSVTILAGESMGKKSQVFTRTPTMYLDFTLKPGSEHHQPIPETWNAFLYIVEGEGAFGSSDSTTTPAHHCLVLGPGEGLSVWNKSSKPLRFVLIGGQPINEPVVQ 256
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PRN1_ARATH (Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.415e-51 Identity = 95/142 (66.90%), Postives = 122/142 (85.92%), Query Frame = 2 Query: 5 NGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEG-EGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRS-SKQLRFVLIAGQPLNEPVVQ 424 NGLQLWINL S++KM EP+Y+E+ S +I RAE +GVEV++IAG+SMG++SPVYTRTPTMFLDFTLKP +Q HQ++PE+W AF Y IEG EGVFG++NSSA+SAH+V+V GD +S WN+S S+ LRF+LIAG+P+ EPVVQ Sbjct: 115 NGLQLWINLPSTEKMTEPKYKELSSLDIPRAEENGVEVKVIAGDSMGIKSPVYTRTPTMFLDFTLKPGSQTHQTVPESWTAFAYIIEGDEGVFGSLNSSAISAHHVVVFGPGDLVSVWNKSTSRSLRFLLIAGEPIGEPVVQ 256
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIRL2_ARATH (Pirin-like protein At2g43120 OS=Arabidopsis thaliana GN=At2g43120 PE=2 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 3.738e-50 Identity = 97/144 (67.36%), Postives = 120/144 (83.33%), Query Frame = 2 Query: 8 GLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTI---EGEGVFGTVNSSAVSAHNVLVLSLG-DGLSAWNR-SSKQLRFVLIAGQPLNEPVVQ 424 GLQLWINLSS++KMIEP YQE+ +I +AE +GVEV++IAGESMG++SPVYTRTPTMFLDFTL+P AQIHQ++PE+WNAF Y + EG GVF + NSS + AH+V+V G DG+S WN+ SSKQLRFVLIAG+P+ EPVVQ Sbjct: 143 GLQLWINLSSNEKMIEPNYQELSHSDIPKAEQNGVEVKVIAGESMGIQSPVYTRTPTMFLDFTLQPGAQIHQNVPESWNAFAYILESGEGGGVFSSSNSSPIPAHSVVVFGPGNDGVSVWNKSSSKQLRFVLIAGEPIGEPVVQ 286
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIRL4_ARATH (Putative pirin-like protein At3g59260 OS=Arabidopsis thaliana GN=At3g59260 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.527e-46 Identity = 91/141 (64.54%), Postives = 110/141 (78.01%), Query Frame = 2 Query: 8 GLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEG-EGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRS-SKQLRFVLIAGQPLNEPVVQ 424 GLQLWINL SS KMIEP+ EI S EI A+ GVEV++IAGESMGV+SP YT+TP MFLDFTL P+AQ HQ++PE+W AF Y +EG EGVF + +SS V AHNV+V GD +S WN S S+ LRF+LIAG+P+ EPVVQ Sbjct: 96 GLQLWINLPSSAKMIEPKNIEISSSEIPSADDYGVEVKVIAGESMGVKSPFYTKTPIMFLDFTLDPKAQTHQAVPESWTAFAYIVEGDEGVFSSSDSSTVQAHNVVVFGTGDEVSVWNTSNSRPLRFLLIAGEPIGEPVVQ 236
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIRL1_ARATH (Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.981e-40 Identity = 84/144 (58.33%), Postives = 105/144 (72.92%), Query Frame = 2 Query: 8 GLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFG--TVNSSAVSAHNVLVLSL-GDGLSAWNRSSK--QLRFVLIAGQPLNEPVVQ 424 GLQLWINLSS K++EP YQEI S++I E DGV VR+IAGE GV+S + TRTPTM+LDFTL P ++I Q IP WNAFVY ++G G FG + SA +AH++LVL L GD L AWN S LRF+L+AG+P+ EP+VQ Sbjct: 124 GLQLWINLSSRQKLVEPSYQEIESKDIAETEKDGVRVRVIAGEWNGVKSKICTRTPTMYLDFTLSPGSRISQPIPLHWNAFVYVLQGHGHFGDSKLQHSAAAAHHLLVLGLGGDMLEAWNGSDSGLPLRFILVAGEPIGEPMVQ 267
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIR_HUMAN (Pirin OS=Homo sapiens GN=PIR PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.056e-36 Identity = 71/141 (50.35%), Postives = 100/141 (70.92%), Query Frame = 2 Query: 5 NGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNS-SAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQ 424 +GLQLW+NL SS+KM+EP+YQE+ SEEI + DGV V +I+GE++G++S VYTRTPT++LDF L P A+ Q IP+ W +F+YTI G+ G ++ + H+ VL GD + N+ K+ FVLIAG+PL EPV+Q Sbjct: 112 HGLQLWVNLRSSEKMVEPQYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAGEPLREPVIQ 252
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIR_RAT (Pirin OS=Rattus norvegicus GN=Pir PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.794e-35 Identity = 70/141 (49.65%), Postives = 97/141 (68.79%), Query Frame = 2 Query: 5 NGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNS-SAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQ 424 +GLQLW+NL S+KM+EP+YQE+ SEEI + DGV V +I+GE++G++S VYTRTPT++LDF L A+ Q IP+ W +F+YTI G+ G ++ + H VL GD + N+ K+ FVLIAG+PL EPVVQ Sbjct: 112 HGLQLWVNLKRSEKMVEPQYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDQGAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHRTAVLGEGDTVQLENKDPKRSHFVLIAGEPLREPVVQ 252
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: PIR_MOUSE (Pirin OS=Mus musculus GN=Pir PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.202e-34 Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = 2 Query: 5 NGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNS-SAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQ 424 +GLQLW+NL S+KM+ P+YQE+ SEEI + DGV V +I+GE++G++S VYTRTPT++LDF L A+ Q IP+ W +F+YTI G+ G ++ + H+ VL GD + N+ K+ FVLIAG+PL EPVVQ Sbjct: 112 HGLQLWVNLRRSEKMVAPQYQELKSEEIPKPTKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDQGAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDAVQLENKDPKRSHFVLIAGEPLREPVVQ 252
BLAST of CB417338 vs. ExPASy Swiss-Prot
Match: Y133_THEAC (Pirin-like protein Ta0133 OS=Thermoplasma acidophilum GN=Ta0133 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.389e-12 Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 8 GLQLWINLSSSDKMIEPRYQEIPSEEIKRAETD-GVEVRIIAGE--------SMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPV 418 G+QLW+N+ +S KM +P Y+ I S++I + D G +RI+AG + + + R +++ ++P + S+PE A + +EG VN S + NV VLS +G + S R + +AG+PLNEP+ Sbjct: 85 GIQLWLNMPASSKMADPAYRSIRSDQIPQISDDYGNRIRIVAGTVNRVSGALNENFQYDLMQRIDPYYVEILMEPDTRTSLSVPEGHRAIMAIVEGS---IRVNGSTFNEKNVAVLS-KEGTDIFIDSQANSRLIFLAGKPLNEPI 226 The following BLAST results are available for this feature:
BLAST of CB417338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417338 ID=CB417338; Name=CB417338; organism=Citrus sinensis; type=EST; length=424bpback to top |