CB417341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1_TOBAC (Glutamate--cysteine ligase, chloroplastic OS=Nicotiana tabacum GN=GSH1 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.788e-18 Identity = 49/90 (54.44%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 13 SGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 SG + N E +MK+ C + SSR S+K Q ++LD VAASPPTEDAVV EPLTKEDLV YLASGCK KEKWRI Sbjct: 22 SGHSSITSNMEMLKMKDICFG-NISSRNSSKPMQGIYLDRVGVERRRGRLAIVAASPPTEDAVVAAEPLTKEDLVAYLASGCKSKEKWRI 110
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1_SOLLC (Glutamate--cysteine ligase, chloroplastic OS=Solanum lycopersicum GN=GSH1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.393e-17 Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 13 SGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 SG + N + RM+E C SSR +++ Q +L++ VAASPPTEDAVV EPLTKEDLVGYLASGCK KEKWRI Sbjct: 22 SGHRSIINNMDMFRMREICFGVDISSRNASRRVQGNYLNHIGVGSRRGDLTIVAASPPTEDAVVAAEPLTKEDLVGYLASGCKSKEKWRI 111
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1_ARATH (Glutamate--cysteine ligase, chloroplastic OS=Arabidopsis thaliana GN=GSH1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13 Identity = 48/104 (46.15%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 1 TIRRSGVCGLA----------KNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 T+ SGVC A +N + RMKE +F SS YS +S L ++ VAASPPTE+AVV TEPLT+EDL+ YLASGCK K+K+RI Sbjct: 12 TVVPSGVCSKAGTKAVVSGGVRNLDVLRMKE---AFGSS--YSRSLSTKSMLLHSVKRSKRGHQLIVAASPPTEEAVVATEPLTREDLIAYLASGCKTKDKYRI 110
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1_BRAJU (Glutamate--cysteine ligase, chloroplastic OS=Brassica juncea GN=GSH1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.719e-13 Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 10 RSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 R+G ++ RMKET VS S+ L + VAASPPTE+AVV TEPLT+EDL+ YLASGCK KEKWRI Sbjct: 21 RTGTKTVSGCVNVLRMKETYVS---------SYSRTLSTKSMLKRSKRGHQLIVAASPPTEEAVVATEPLTREDLIAYLASGCKSKEKWRI 102
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1_MEDTR (Glutamate--cysteine ligase, chloroplastic OS=Medicago truncatula GN=GSH1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.910e-13 Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 55 MKETCVS--FSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 +++T +S FS SS+ S ++L + VAASPPTEDAVV TEPLTK+DL+ YLASGCK K+KWRI Sbjct: 26 IRKTSISNTFSFSSKNSLSFKRILTSGGSRRFI-------VAASPPTEDAVVATEPLTKQDLIDYLASGCKTKDKWRI 96
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1A_ORYSJ (Glutamate--cysteine ligase A, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.006e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 169 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 VAASPPTE+AV +TEPLTKEDLV YL SGCKPKE WRI Sbjct: 43 VAASPPTEEAVQMTEPLTKEDLVAYLVSGCKPKENWRI 80
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1A_ORYSI (Glutamate--cysteine ligase A, chloroplastic OS=Oryza sativa subsp. indica GN=GSH1-1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.006e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 169 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 VAASPPTE+AV +TEPLTKEDLV YL SGCKPKE WRI Sbjct: 43 VAASPPTEEAVQMTEPLTKEDLVAYLVSGCKPKENWRI 80
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1B_ORYSJ (Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 169 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 VAASPPTE+AV +TEPLTKEDL+ YL SGCKPKE WRI Sbjct: 47 VAASPPTEEAVQMTEPLTKEDLMAYLVSGCKPKENWRI 84
BLAST of CB417341 vs. ExPASy Swiss-Prot
Match: GSH1B_ORYSI (Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. indica GN=GSH1-2 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 169 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRI 282 VAASPPTE+AV +TEPLTKEDL+ YL SGCKPKE WRI Sbjct: 47 VAASPPTEEAVQMTEPLTKEDLMAYLVSGCKPKENWRI 84 The following BLAST results are available for this feature:
BLAST of CB417341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417341 ID=CB417341; Name=CB417341; organism=Citrus sinensis; type=EST; length=284bpback to top |