CB417363

Overview
NameCB417363
Unique NameCB417363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:429..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 4.102e-31
Identity = 65/88 (73.86%), Postives = 71/88 (80.68%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 266
            KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  122 KPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31
Identity = 65/88 (73.86%), Postives = 71/88 (80.68%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 266
            KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  121 KPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.559e-30
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 266
            KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI +RPAW+K +
Sbjct:  121 KPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 2.940e-29
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 278
            K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I++RPAWAKV+ L K
Sbjct:  171 KGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.014e-29
Identity = 58/92 (63.04%), Postives = 76/92 (82.61%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 278
            KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  121 KPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.553e-29
Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 278
            KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  121 KPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 1.459e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 278
            K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I +RP+W K LAL K
Sbjct:  123 KGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 5.189e-26
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 263
            K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KV
Sbjct:  125 KSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.363e-25
Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 3
Query:   12 FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 266
            +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KVL
Sbjct:  128 YGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 1.159e-17
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 3
Query:    6 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 278
            PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:  121 PMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
The following BLAST results are available for this feature:
BLAST of CB417363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GST11_ARATH4.102e-3173.86Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_ARATH5.357e-3173.86Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF_HYOMU1.559e-3069.32Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF6_ARATH2.940e-2968.48Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_TOBAC5.014e-2963.04Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF2_TOBAC8.553e-2963.04Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF_SILCU1.459e-2867.74Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF4_ARATH5.189e-2664.37Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GST16_ARATH3.363e-2564.71Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF1_MAIZE1.159e-1749.45Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]

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Properties
Property NameValue
Genbank descriptionEST0444 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P122 similar to glutathione-S-transferase (acc# AAF65767), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417363 ID=CB417363; Name=CB417363; organism=Citrus sinensis; type=EST; length=432bp
ACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAGAAAAT
GAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTTGTCTCA
GTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGCATCATC
TCCCCAATATTAATTTGTTGTTGGGGACGCCTGTCAAGAAGCTGTTTGAT
GCACGCCCCCATGTTAGCGCATGGGCAGCTGATATCACTTCCAGACCGGC
TTGGGCTAAGGTCCTTGCCTTGCTCAAACACTGAACACTCTGCCCGCTAC
CTACTAGACGTTAGTCGCTCCTCGGTGGTCACTTATCTTTTGTAATACCT
ATTAGGCTGGTTTTCGAGTTCGTATTCTCTTGTTTGGCGTTTGTCATCAA
TATTCTGCAGAATATTGATGCTTTGTAGTTTG
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