CB417364

Overview
NameCB417364
Unique NameCB417364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length355
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH1_TOBAC (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.793e-35
Identity = 73/117 (62.39%), Postives = 85/117 (72.65%), Query Frame = 1
Query:    4 ILMNKGIRTNVKKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRRGNE 354
            +LM KG+RTN  KRIG  PG+EVGDIFFFRMELCLVGLH P MAGI YM   + +            GGY+D+  DGDVLIY+GQGG + RKD +V DQKLERGNLALEK++ R NE
Sbjct:  250 MLMTKGVRTNQTKRIGNAPGIEVGDIFFFRMELCLVGLHAPTMAGIDYMSVKLTMDEEPLAVSIVSSGGYDDDGGDGDVLIYTGQGG-VQRKDGQVFDQKLERGNLALEKSVHRANE 365          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH3_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 4.707e-29
Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 1
Query:    7 LMNKGIRTNVKKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRRGN 351
            LM+ G+RTN+KKR+G VPG+EVGDIFF R+E+CLVGLH   MAGI Y+                  G YE   +D + LIYSGQGGN + K+++ +DQKLERGNLALE +LR+GN
Sbjct:  194 LMSNGVRTNMKKRVGTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYIISKAGSDEESLATSIVSSGRYEGEAQDPESLIYSGQGGNAD-KNRQASDQKLERGNLALENSLRKGN 307          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH1_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.148e-29
Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 1
Query:   10 MNKGIRTNVKKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRR 345
            M +G+RTN KKR G VPGVE+GD+FFFR E+CLVGLH P MAGI Y+                  G Y+++  + DVLIY+GQGGN + KDK+ +DQKLERGNLALEK+LRR
Sbjct:  198 MGRGVRTNTKKRPGIVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGNPDVLIYTGQGGNAD-KDKQSSDQKLERGNLALEKSLRR 308          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH9_ARATH (Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.982e-19
Identity = 45/106 (42.45%), Postives = 71/106 (66.98%), Query Frame = 1
Query:   37 KKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRRGNE 354
            K+ +G++PGV+VGDIFFFR ELC++GLH    +GI ++  +++             GGYED+ + GDV++Y+GQGG  +R  ++   Q+LE GNLA+E+++  G E
Sbjct:  201 KRIVGSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDFLTGSLSSNGEPIATSVIVSGGYEDDDDQGDVIMYTGQGGQ-DRLGRQAEHQRLEGGNLAMERSMYYGIE 305          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH8_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.533e-19
Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 1
Query:    1 TILMNKGIRTNVKKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRRGNE 354
            T  MN G+RTN+ +RIG +PGV+VGDIF++  E+CLVGLH     GI  +    +             G Y++  ED + LIYSG GG       +  DQ L+RGN ALE ++RR NE
Sbjct:  294 TNCMNLGVRTNMTRRIGPIPGVQVGDIFYYWCEMCLVGLHRNTAGGIDSLLAKESGVDGPAATSVVTSGKYDNETEDLETLIYSGHGG-------KPCDQVLQRGNRALEASVRRRNE 404          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH2_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.192e-18
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 1
Query:    4 ILMNKGIRTNVKKRI-GAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRRGNE 354
            I+ ++G+  N  K I G V GVEVGDIFF+RMELC++GLH    AGI  +    +             GGYED+ + GDVL+Y+G GG  + + K+  +Q+L  GNL +E+++  G E
Sbjct:  191 IMRDRGLWLNYDKHIVGPVTGVEVGDIFFYRMELCVLGLHGQTQAGIDCLTAERSATGEPIATSIVVSGGYEDDEDTGDVLVYTGHGGQ-DHQHKQCDNQRLVGGNLGMERSMHYGIE 307          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH7_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.421e-17
Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   19 GIRTNVKKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRKDKEVTDQKLERGNLALEKNLRRGNE 354
            G++TN ++RIGAVPG+ VGDIF++  E+CLVGLH     GI +     +             G Y+   E  D LIYSGQGG          DQ+++ GNLALE ++ +GN+
Sbjct:  217 GVKTNTRRRIGAVPGIHVGDIFYYWGEMCLVGLHKSNYGGIDFFTAAESAVEGHAAMCVVTAGQYDGETEGLDTLIYSGQGG--TDVYGNARDQEMKGGNLALEASVSKGND 326          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH5_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.398e-17
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   46 IGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNINRK--DKEVTDQKLERGNLALEKNLRRGN 351
            IG VPGVEVGD F +RMEL L+G+H P  +GI YM                  GGY D +++ DVLIY+GQGGN+ +K  ++   DQ+L  GNLAL+ ++ + N
Sbjct:  364 IGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDD---GGELVATSIVSSGGYNDVLDNSDVLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKN 464          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH6_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.570e-16
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 1
Query:    1 TILMNKGIRTNVKKRI-GAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMGPTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGGNI------NRKDKEVTDQKLERGNLALEKNLRR 345
            TIL   G   N    I G VPGVEVGD F +RMEL ++G+H P  AGI YM                  GGY+D++++ DVL Y+GQGGN+        + KE  DQKL  GNLAL  ++ +
Sbjct:  313 TILKRNGKFLNSGVHILGEVPGVEVGDEFQYRMELNILGIHKPSQAGIDYM----KYGKAKVATSIVASGGYDDHLDNSDVLTYTGQGGNVMQVKKKGEELKEPEDQKLITGNLALATSIEK 430          
BLAST of CB417364 vs. ExPASy Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   37 KKRIGAVPGVEVGDIFFFRMELCLVGLHHPIMAGIGYMG----PTVNLXXXXXXXXXXXXGGYEDNVEDGDVLIYSGQGG-NINRKDKEVTDQKLERGNLALE 330
            +K IG +PG++VG  FF R E+C VG H+  + GI YM        +             G YED++++ D + Y+GQGG N+    +++ DQ LERGNLAL+
Sbjct:  145 RKIIGDLPGIDVGHRFFSRAEMCAVGFHNHWLNGIDYMSMEYEKEYSNYKLPLAVSIVMSGQYEDDLDNADTVTYTGQGGHNLTGNKRQIKDQLLERGNLALK 247          
The following BLAST results are available for this feature:
BLAST of CB417364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SUVH1_TOBAC9.793e-3562.39Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH3_ARATH4.707e-2954.78Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH1_ARATH6.148e-2957.14Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH9_ARATH1.982e-1942.45Probable histone-lysine N-methyltransferase, H3 ly... [more]
SUVH8_ARATH7.533e-1943.22Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH2_ARATH2.192e-1841.53Histone-lysine N-methyltransferase, H3 lysine-9, H... [more]
SUVH7_ARATH1.421e-1741.07Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH5_ARATH5.398e-1745.19Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH6_ARATH4.570e-1642.62Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH4_ARATH2.772e-1338.83Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
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Properties
Property NameValue
Genbank descriptionEST0447 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P126 similar to SET-domain protein (acc# CAC67503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417364 ID=CB417364; Name=CB417364; organism=Citrus sinensis; type=EST; length=355bp
ACAATCTTAATGAATAAAGGGATTCGAACCAACGTTAAGAAGAGAATTGG
AGCTGTCCCTGGTGTTGAAGTTGGGGATATTTTCTTTTTCAGGATGGAAT
TGTGCTTGGTTGGGTTGCATCATCCAATTATGGCAGGAATTGGTTACATG
GGTCCGACAGTTAATTTAGAAGAAGAGTCCGTGGCGGTTAGTGTTGTTTC
GTCCGGGGGATATGAGGATAATGTAGAGGATGGGGATGTGTTGATTTACA
GTGGACAAGGAGGGAATATTAATAGGAAAGACAAGGAAGTGACAGACCAG
AAACTTGAGAGGGGTAATCTTGCTTTGGAGAAAAACTTGCGTCGGGGAAA
TGAGG
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