CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1254..1997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.552e-72
Identity = 133/163 (81.60%), Postives = 151/163 (92.64%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GITFNVQPKMKALEIAE+A+ AILS +F QVRVNLPNSDMVGHTGDIEATVVACKAADEAVK+IIDAIE+VGGIY++TADHGNAEDMVKR+K G+P + K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  392 GITFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDAIEQVGGIYVITADHGNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 554          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.598e-71
Identity = 133/163 (81.60%), Postives = 150/163 (92.02%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GITFNVQPKMKA+EIAE+ + AILS++F QVRVNLPNSDMVGHT  IEATVVACKAADEAVKIIIDAIE+VGGIY+VTADHGNAEDMVKRNK G+PLL K+GNIQ+LTSHTL+PVPIAIGGPGL   V+FR D+PNGGLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  321 GITFNVQPKMKAVEIAEKGRGAILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDAIEQVGGIYVVTADHGNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLI 483          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.332e-70
Identity = 132/163 (80.98%), Postives = 147/163 (90.18%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GITFNV+PKMKALEIAER + AILS +F QVRVNLPN DMVGHTGDI+AT+ ACK+ADEAVK+I++AIE+VGGIYLVTADHGNAEDMVKRNK GEP L K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR DLP GGLANVAATF+NLHG EAPSDYEPSLI
Sbjct:  392 GITFNVKPKMKALEIAERTRDAILSGKFDQVRVNLPNGDMVGHTGDIKATIEACKSADEAVKMILEAIEQVGGIYLVTADHGNAEDMVKRNKKGEPALDKNGNIQILTSHTCEPVPIAIGGPGLAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLI 554          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 2.332e-70
Identity = 129/163 (79.14%), Postives = 149/163 (91.41%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GITFNVQPKMKA+EIAE+A+ AILS +F QVRVN+PN DMVGHTGD+EATVV CKAADEAVK+IIDAIE+VGGIY+VTADHGNAEDMVKR+KSG+P+  K G IQ+LTSHTL+PVPIAIGGPGL   V+FR+D+P GGLANVAAT +NLHG+EAPSDYEP+LI
Sbjct:  389 GITFNVQPKMKAIEIAEKARDAILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 551          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.083e-67
Identity = 128/163 (78.53%), Postives = 145/163 (88.96%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GITFNV P MKALEIAE+A+ A+LS +F QVRVNLPN DMVGHTGDIEATVVACKAADEAVKII+DA+E+VGGIYLVTADHGNAEDMVKRNKSG+PLL K+  IQ+LTSHTL+PVP+AIGGPGL   VKFR D+   GLANVAAT +NLHG+EAP+DYE +LI
Sbjct:  392 GITFNVAPNMKALEIAEKARDALLSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDAVEQVGGIYLVTADHGNAEDMVKRNKSGKPLLDKNDRIQILTSHTLQPVPVAIGGPGLHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLI 554          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.172e-67
Identity = 127/163 (77.91%), Postives = 145/163 (88.96%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GI+FNVQPKMKALEIAE+A+ AILS +F QVRVNLPN DMVGHTGDIEATVVAC+AAD AV+ I+DAIE+VGGIY+VTADHGNAEDMVKR+KSG+P L K+GN+Q+LTSHTLKPVPIAIGGPGL   V+FR D+   GLANVAAT +NLHG+ APSDYE SLI
Sbjct:  393 GISFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACEAADRAVRTILDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPALDKEGNLQILTSHTLKPVPIAIGGPGLSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLI 555          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 1.730e-65
Identity = 125/163 (76.69%), Postives = 143/163 (87.73%), Query Frame = 3
Query:    3 GITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLL-KDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            GI+FNVQPKMKALEI E+A+ AILS +F QVRVN+PN DMVGHTGDIEATVVAC+AAD AVK+I DAIE+V GIY+VTADHGNAEDMVKR+KSG+P L K+G +Q+LTSHTLKPVPIAIGGPGL   V+FR DL   GLANVAAT +NLHG+ APSDYEP+LI
Sbjct:  391 GISFNVQPKMKALEIGEKARDAILSGKFDQVRVNIPNGDMVGHTGDIEATVVACEAADLAVKMIFDAIEQVKGIYVVTADHGNAEDMVKRDKSGKPALDKEGKLQILTSHTLKPVPIAIGGPGLAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLI 553          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.914e-29
Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 3
Query:    6 ITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            I F+  P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  389 IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.914e-29
Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 3
Query:    6 ITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD--GNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            I F+  P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHTL PVPI+I  P   + ++F + L N GLANVAAT +++ GYE P  Y PSLI
Sbjct:  389 IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PSEP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.988e-22
Identity = 66/152 (43.42%), Postives = 84/152 (55.26%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 464
            T+++QP+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I+DA+EKVGG  L+TADHGN E M                Q  T+HT +PVP    G     +VK R     G LA+VA T + L G E P
Sbjct:  364 TYDLQPEMSAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDTCVGRIVDALEKVGGEALITADHGNVEQMEDECTG----------QAHTAHTTEPVPFIYVG---KRNVKVR---EGGVLADVAPTMLKLLGLEKP 499          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
PMGI_MESCR5.552e-7281.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU3.598e-7181.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_TOBAC2.332e-7080.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO2.332e-7079.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MAIZE1.083e-6778.532,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH9.172e-6777.91Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMG1_ARATH1.730e-6576.692,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN9.914e-2947.24Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC9.914e-2947.242,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEP18.988e-2243.422,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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