CB610598

Overview
NameCB610598
Unique NameCB610598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1856 contig Csv1_Contig1856:509..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 4.726e-88
Identity = 163/196 (83.16%), Postives = 181/196 (92.35%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            V KD  V AQ  +RAERAGFKAI LTVDTPRLGRREADIKNRFVLPP LTLKN+EG+ +GKMDK +DSGL+SYVA QIDRSL+WKDV WLQTITSLPILVKGV+TAEDA LA+Q+GAAGIIVSNHGARQLDYVPAT+MALEEVV+AA+GR+PVFLDGGVRRGTDVFKALALGA+GVF+GRPV FSLA +GEAGV+K
Sbjct:  130 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKK 325          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 1.858e-84
Identity = 157/196 (80.10%), Postives = 176/196 (89.80%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            V K+  V  Q  +RAERAGFKAI LTVDTPRLGRRE+DIKNRF LPP+LTLKN+EGL +GKMD+ +DSGLASYVA QIDR+L+WKDV+WLQTIT LPILVKGVLT EDA +AIQ GAAGIIVSNHGARQLDYVPAT+ ALEEVV+A +GR+PVFLDGGVRRGTDVFKALALGASG+F+GRPV FSLA +GEAGVRK
Sbjct:  130 VYKNRNVVEQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRK 325          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 2.683e-83
Identity = 153/196 (78.06%), Postives = 177/196 (90.31%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            V K+  V  Q  +RAE+AGFKAI LTVDTPRLGRRE+DIKNRF LPP+LTLKN+EGL +GKMD+ +DSGLASYVA QIDR+L+WKD++WLQTIT++PILVKGVLT EDA +AIQ GAAGIIVSNHGARQLDYVPAT+ ALEEVV+A +GRVPVFLDGGVRRGTDVFKALALGASG+F+GRPV F+LA +GEAGV+K
Sbjct:  130 VYKNRKVVEQLVRRAEKAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKK 325          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.936e-57
Identity = 113/198 (57.07%), Postives = 145/198 (73.23%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEG---LYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVR 588
            + KD  +  Q  KRAE+ G+KAI +TVDTP LG R  D++NRF LPP L +KN+E     +  K +  D+SGLA YVA  ID SL+W D+ WL+ +TSLPI+VKG+L  +DA  A+++G  GI+VSNHGARQLD VPAT+  L E+V+A +G+V VFLDGGVR+GTDV KALALGA  VFVGRP+ + LA  GE GV+
Sbjct:  133 IYKDREISRQIVKRAEKQGYKAIFVTVDTPYLGNRIDDVRNRFKLPPQLRMKNFETNDLAFSPKGNFGDNSGLAEYVAQAIDPSLSWDDITWLRRLTSLPIVVKGILRGDDAKEAVKHGVDGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQ 330          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.639e-56
Identity = 110/198 (55.56%), Postives = 146/198 (73.74%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKT---DDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVR 588
            + KD  V  +  ++AE+ G+KAI +TVDTP LG R  D++NRF LPP L +KN+E   +    +    DDSGLA+YVA  ID S++W+D+KWL+ +TSLPI+ KG+L  +DA  A+++G  GI+VSNHGARQLD VPAT+  L E+V+A +G+V VFLDGGVR+GTDV KALALGA  VFVGRP+ + LA  GE GV+
Sbjct:  133 IYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQ 330          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.419e-53
Identity = 106/196 (54.08%), Postives = 135/196 (68.88%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            V KD  V  +  KRAE  G+ A+ LTVDTP LG+R AD KN F LP  L+LK +E L +  +D     GL  Y+A  ID SL W D+KWL++IT LPILVKG++  +DA LA+QYGA GIIVSNHG RQLD  P+T+  L  + +  +GRVP+ LDGG+RRGTDV KALA GA+ V +GRP+ + L+  G+ GV K
Sbjct:  159 VFKDRKVSEELVKRAESIGYSALVLTVDTPFLGKRTADFKNSFKLPNGLSLKIFEKLMLSNLD----GGLNQYIATMIDPSLTWNDLKWLKSITKLPILVKGIMCPKDAELALQYGADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLK 350          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.144e-44
Identity = 92/190 (48.42%), Postives = 127/190 (66.84%), Query Frame = 1
Query:   22 VDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            ++ Q  ++ E  GFKA+ +TVD P++G R  DI N+  L   L LK+     +G +       +  +  + ID S+ W+D+ W Q++T LPI++KG+LT EDA LA+++   GIIVSNHG RQLD VPA++ AL EVV A KG+V V+LDGG+R G DV KALALGA  VFVGRP+ + LA  GE GV++
Sbjct:  137 INKQMIQKVESLGFKALVITVDVPKVGNRRNDITNQVDLMKKLLLKDLGSPEMGNV-------MPYFQMSPIDPSICWEDLSWFQSMTRLPIILKGILTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKE 319          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 1.945e-41
Identity = 92/187 (49.20%), Postives = 124/187 (66.31%), Query Frame = 1
Query:   31 QDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            Q  +RAE  GFKA+ +T+DTP LG R  D +N+  L  ++ LK+   L   K +K   S   S+       S  W D+  LQ+IT LPI++KG+LT EDA LA+++   GI+VSNHG RQLD V A++ AL EVV A KG++ V++DGGVR GTDV KALALGA  +F+GRP+ + LA  GE GV++
Sbjct:  140 QMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRAL---KEEKPTQSVPVSFPK----ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKE 319          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.541e-41
Identity = 93/196 (47.45%), Postives = 126/196 (64.29%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            V  D  ++ Q  +R E  GFKA+ +T+DTP  G R  DI+N+  L  +LTL + +    G       + +  +    I  SL W D+ W Q+IT LPI++KG+LT EDA LA+++   GIIVSNHG RQLD V A++ AL EVV A KG++ V+LDGGVR G DV KALALGA  +F+GRP+ + LA  GE GV++
Sbjct:  131 VHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQ--LRRNLTLTDLQSPKKG-------NAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKE 317          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.858e-38
Identity = 89/196 (45.41%), Postives = 124/196 (63.27%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 591
            V  D  ++ Q  +R E  GFKA+ +TVD P LG R  + ++   L  ++ LK+       K      SGL + ++     S  W D+  LQ++T LPI++KG+LT EDA LA+++   GIIVSNHG RQLD VPA++ AL EVV A  G++ V++DGGVR G DV KALALGA  +F+GRP+ + LA  GE GV++
Sbjct:  131 VQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESK------SGLPTPLSMPSSSSC-WNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKE 319          
The following BLAST results are available for this feature:
BLAST of CB610598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX_SPIOL4.726e-8883.16Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
GOX2_ARATH1.858e-8480.10Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH2.683e-8378.06Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
HAOX1_MOUSE1.936e-5757.07Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX1_HUMAN1.639e-5655.56Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX_DICDI8.419e-5354.08Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_BOVIN7.144e-4448.42Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
HAOX2_RAT1.945e-4149.20Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_HUMAN2.541e-4147.45Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX2_MOUSE5.858e-3845.41Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_G06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610598 ID=CB610598; Name=CB610598; organism=Citrus sinensis; type=EST; length=592bp
GGGGTGACCAAGGACCCGTATGTGGACGCACAGGATCNAAAAAGAGCTGA
AAGGGCCGGTTTTAAGGCGATTGATCTTACCGTCGATACTCCAAGGCTTG
GCCGTCGGGAAGCTGATATTAAGAACAGATTTGTTTTGCCGCCACATCTG
ACTTTGAAGAACTATGAGGGCTTGTATATTGGCAAGATGGATAAGACTGA
TGACTCTGGATTAGCTTCGTATGTTGCCAACCAAATTGACCGGTCACTGA
ACTGGAAGGATGTGAAGTGGCTTCAAACAATCACCTCACTGCCAATACTC
GTGAAGGGTGTTCTTACTGCTGAGGATGCAAGTCTAGCAATACAATATGG
AGCTGCAGGAATCATTGTATCCAATCACGGAGCGCGCCAACTAGATTATG
TCCCTGCAACTGTTATGGCTTTGGAAGAGGTTGTTCAAGCTGCAAAAGGC
CGAGTTCCTGTTTTCCTTGATGGTGGGGTTCGTCGTGGAACCGATGTCTT
CAAGGCTTTGGCTCTAGGAGCATCTGGAGTATTTGTTGGAAGGCCAGTAC
CATTCTCGCTGGCAGTTGATGGAGAGGCTGGTGTGAGAAAAG
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