CB610607

Overview
NameCB610607
Unique NameCB610607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9763 contig Csv1_Contig9763:8..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 342.043 bits (876), Expect = 2.064e-93
Identity = 188/247 (76.11%), Postives = 202/247 (81.78%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREAL-LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALGXEPTLQIGYQPADPISVVTAGPSL 763
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCSSSSM+KTLERYQKCNYGAPE N+S REAL +SSQQEYLKLKARYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE  L+EAN+TLKQR             LMEG  +N LQ   +A+D GYG +  Q QGD FFH L  EPTLQIGYQ  DPI+V  AGPS+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQR-------------LMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSV 232          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.790e-90
Identity = 179/252 (71.03%), Postives = 201/252 (79.76%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREAL---LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDSFFHA--LGXEPTLQIGYQPADPISVVTAGPSL 763
            MGRGRVEL R+ENKINR+VTFAKRRNGLLKKAYELSVL D EVALI+FSN GKLYEFCS+SSM+KTLERYQKCNYGAPE NV+++EAL   LSSQQEYLKLKARYE+LQRSQRNL+GE+LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR              MEGYQ+N+LQLN SAED GYG        GD  F    +  EPTLQIGY   DP SVVTAGPS+
Sbjct:    1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR--------------MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSM 238          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 1.013e-81
Identity = 156/193 (80.83%), Postives = 165/193 (85.49%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREAL-LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVN 601
            MGRGRVEL RIE KINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCSSSSM+KTLERYQKCNYGAPEPN+S REAL +SSQQEYLKLK RYEALQRSQRNLLGE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE  L+EAN+TLKQR             LMEG Q+N
Sbjct:    1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQR-------------LMEGSQLN 180          

HSP 2 Score: 32.7278 bits (73), Expect = 1.013e-81
Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  621 VQKIVVMGLNQLNLRAIASFTPWXVNXHCKL 713
            + K+  M   QL LRA+ASF  W VN  CKL
Sbjct:  186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.091e-81
Identity = 171/252 (67.86%), Postives = 195/252 (77.38%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREAL---LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDSFFHALGXEPTLQIGYQPADPISVVTAGPSL 763
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCSSSSM++TLERYQKCNYGAPEPNV +REAL   LSSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+             L+L +GYQ+  LQLNP+ E+   YG    Q Q    +FF  L  EP LQIGYQ       + AGPS+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLR-------------LRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSV 236          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.534e-80
Identity = 170/253 (67.19%), Postives = 193/253 (76.28%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREAL---LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDS---FFHALGXEPTLQIGYQPADPISVVTAGPS 760
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCSSSSM++TLERYQKCNYG PEPNV +REAL   LSSQQEYLKLK RY+ALQR+QRNLLGE+LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+             L+L +GYQ+  LQLNP+ ED    YG    Q Q +S   FF  L  EP LQ+GYQ       + AGPS
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLR-------------LRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPS 238          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.074e-77
Identity = 160/244 (65.57%), Postives = 183/244 (75.00%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDSFFHALGXEPTLQIGYQPADPISVVTA 751
            MGRGRVEL  IENKINR+VTFAKRR  LLKKAYELSVL D EVALIIFSN GKLYEFCSS+SM+KTLE+YQKCN+G+PE  + +RE   SSQQEYLKLK R EALQRSQRNLLGE+LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R               E  Q N  Q+ +PS     GYG +PAQ  G++F+H L  EPTLQIGY     ++  TA
Sbjct:    1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIISRET-QSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRR-------------FEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATA 230          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.119e-68
Identity = 145/234 (61.97%), Postives = 168/234 (71.79%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALGXEPTLQIGY 718
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCSSS+M+KTL+RYQKC+YG+ E N    + L +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L  +    + +R     G    EG + N            Y    AQ QG   +  L   PTLQ+GY
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVT----------YAHHQAQSQG--LYQPLECNPTLQMGY 222          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.140e-67
Identity = 141/234 (60.26%), Postives = 170/234 (72.65%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALGXEPTLQIGY 718
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EV+LI+FSN GKLYEFCS+S+M+KTLERYQKC+YG+ E N    + L +S +EYLKLK RYE LQR QRNLLGE+LGPLNSKELE LERQLD SLKQ+R  +TQYMLD L++LQ KE +L +AN+ L  +    + +RH    G     G++          ++  YG   A  QG   + +L  +PTLQIGY
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGG-----GWE------GGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGY 221          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.490e-67
Identity = 146/240 (60.83%), Postives = 175/240 (72.92%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREA--LLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHAL--GXEPTLQIGYQPAD 730
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCS+ SM KTLE+YQKC+Y  PE  V  RE+  L +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++     H    G Q+ E G  +   +  P  +   +G       G+ FFH L    EPTLQIGY PA+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAE 230          
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.490e-67
Identity = 146/240 (60.83%), Postives = 175/240 (72.92%), Query Frame = 2
Query:   26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREA--LLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHAL--GXEPTLQIGYQPAD 730
            MGRGRVEL RIENKINR+VTFAKRRNGLLKKAYELSVL D EVALIIFSN GKLYEFCS+ SM KTLE+YQKC+Y  PE  V  RE+  L +S+ EYLKLKAR E LQR+QRNLLGE+L  L  KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++     H    G Q+ E G  +   +  P  +   +G       G+ FFH L    EPTLQIGY PA+
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAE 230          
The following BLAST results are available for this feature:
BLAST of CB610607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
AGL9_PETHY2.064e-9376.11Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MTF1_PEA2.790e-9071.03MADS-box transcription factor 1 OS=Pisum sativum G... [more]
AGL9_SOLLC1.013e-8180.83Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
SEP3_ARATH3.091e-8167.86Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL1.534e-8067.19Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_ARADE2.074e-7765.57Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
SEP1_ARATH5.119e-6861.97Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
SEP2_ARATH1.140e-6760.26Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
MADS7_ORYSJ1.490e-6760.83MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI1.490e-6760.83MADS-box transcription factor 7 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_E11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610607 ID=CB610607; Name=CB610607; organism=Citrus sinensis; type=EST; length=765bp
GGGGGAAGAAAGAAACGAGAAGAAAATGGGAAGGGGTAGGGTTGAGTTGA
TGAGGATAGAGAACAAGATCAACAGGCGAGTGACCTTTGCAAAGAGAAGA
AATGGCCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTAGTGATGTTGA
GGTTGCTCTCATCATTTTCTCCAATAGTGGAAAGCTGTACGAGTTTTGCA
GTAGTTCAAGCATGGTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTAT
GGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGCTAAGTAGCCA
GCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGATCCC
AAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAGCTT
GAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATCAAC
AAGAACTCAGTACATGCTGGATACCCTTACTGAACTGCAACATAAGGAAC
AGTTGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGACGATGACGCTA
AGGCACGCCGCTTTTGCTGGTTTGCAGTTGATGGAGGGATACCAAGTGAA
CACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTATGGGCTTAAAC
CAGCTCAACCTCAGGGCGATAGCTTCTTTCACGCCTTGGGNNGTGAACCN
ACATTGCAAATTGGATACCAGCCTGCGGACCCAATATCGGTTGTCACAGC
AGGCCCGAGTCTGAA
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