CB610622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_XENTR (NHP2-like protein 1 OS=Xenopus tropicalis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.713e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD+ L T+LDLVQQAANYKQL+KGANEATKTLNRGI+EFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIAC+VT E SQLK QIQ L+ +IE+LL+ Sbjct: 1 MTEPEVNPKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTIKEGSQLKPQIQSLQQSIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_XENLA (NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.713e-43 Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD+ L T+LDLVQQ+ANYKQL+KGANEATKTLNRGI+EFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ AIE+LL+ Sbjct: 1 MTEPEVNPKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKPQIQSVQQAIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_CAEEL (NHP2-like protein 1 homolog OS=Caenorhabditis elegans GN=M28.5 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.462e-43 Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ + VNPKA+PLAD+NL ++DLVQQA NYKQLKKGANEATKTLNRGISE IVMAAD EDKNVPYVFV SK ALGRACGVTRPVIA S+T NE SQLK+QIQ++K+ +EKLLI Sbjct: 1 MADDGVNPKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASITQNEGSQLKSQIQKIKEDVEKLLI 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: SNU13_SCHPO (13 kDa ribonucleoprotein-associated protein OS=Schizosaccharomyces pombe GN=snu13 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.837e-42 Identity = 90/124 (72.58%), Postives = 100/124 (80.65%), Query Frame = 3 Query: 102 AVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 +VNPKA+PLADS L ILDLVQQA++YKQL+KGANEATKTLNRGISEFIVMAADT EDKNVPYVFVPSK ALGRACGV+RPVI+ S+T+NEAS L QIQ +K AIEKLLI Sbjct: 2 SVNPKAFPLADSGLTQQILDLVQQASHYKQLRKGANEATKTLNRGISEFIVMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQIQAIKLAIEKLLI 125
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_RAT (NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 88/128 (68.75%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD++L +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_MOUSE (NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 88/128 (68.75%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD++L +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_MACFA (NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 88/128 (68.75%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD++L +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_HUMAN (NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 88/128 (68.75%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD++L +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NH2L1_BOVIN (NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 88/128 (68.75%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 90 MSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 M+ VNPKAYPLAD++L +LDLVQQ+ NYKQL+KGANEATKTLNRGISEFIVMAAD EDKNVPYVFV SKQALGRACGV+RPVIACSVT E SQLK QIQ ++ +IE+LL+ Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: SNU13_CANAL (13 kDa ribonucleoprotein-associated protein OS=Candida albicans GN=SNU13 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.654e-40 Identity = 87/124 (70.16%), Postives = 96/124 (77.42%), Query Frame = 3 Query: 102 AVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 473 A NPKA+PLADS L ILD+VQQ+ N +QLKKGANEATKTLNRGISEFI+MAADT EDKNVPYVFVPSK ALGRACGV+RPVIA SVTSN+AS +K QI +KD IE LLI Sbjct: 3 APNPKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQIYGIKDKIETLLI 126 The following BLAST results are available for this feature:
BLAST of CB610622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610622 ID=CB610622; Name=CB610622; organism=Citrus sinensis; type=EST; length=662bpback to top |