CB610644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.816e-24 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 2 Query: 5 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 +TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+DGEEIAPLAKENVATP Sbjct: 540 ATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDGEEIAPLAKENVATP 608
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.879e-23 Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 2 Query: 8 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG++G+EIAPLAKENVATP Sbjct: 541 TTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVEGDEIAPLAKENVATP 608
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.925e-22 Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 2 Query: 8 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++GEEIAPLAKENVATP Sbjct: 540 TTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGEEIAPLAKENVATP 607
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22 Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 2 Query: 11 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG +GEEIAPLAKENV TP Sbjct: 542 TVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGTEGEEIAPLAKENVPTP 608
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.128e-21 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 5 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 +TT++RA+ GT A EM+KN M QDLSWKGPAK WE LL+L VAG EPGI+GEEIAPLAKENVA P Sbjct: 540 ATTLKRAIKVVGTPAYEEMVKNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGIEGEEIAPLAKENVAAP 608
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21 Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 5 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 +TT++RA+ GT A EM++N M QDLSWKGPAK WE LL L VAGSEPG++GEEIAPLAKENVA P Sbjct: 538 ATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSEPGVEGEEIAPLAKENVAAP 606
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.088e-21 Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 2 Query: 5 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 + TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK WE+ LLNLEV G+ GIDG+EIAPLAKENVATP Sbjct: 535 AATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKLWEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.088e-21 Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 5 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 +TT++RA+ GT A EM++N M QDLSWKGPAK WE LL+L VAG EPG++GEEIAPLAKENVA P Sbjct: 537 ATTLQRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGVEGEEIAPLAKENVAAP 605
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.056e-20 Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 2 Query: 14 VRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +GEEIAPLAKENVATP Sbjct: 545 VTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGEEIAPLAKENVATP 610
BLAST of CB610644 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.073e-20 Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 2 Query: 8 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 211 + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS+PGI+GEEIAPLAK+NVATP Sbjct: 498 SNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQNVATP 565 The following BLAST results are available for this feature:
BLAST of CB610644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610644 ID=CB610644; Name=CB610644; organism=Citrus sinensis; type=EST; length=404bpback to top |