CB610695

Overview
NameCB610695
Unique NameCB610695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13583 contig Csv1_Contig13583:1..484. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.399e-18
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            +TC QV+  L PCI+Y   GGAV PACC GIR +N  +KTT DR+T CNC+K+ +A +PG++ +    LP  C    PYK++   +C+
Sbjct:   27 LTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCA 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.889e-18
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC QVT  L PCI Y   GGAV PACC GIR +N  ++TT DR+T CNC+K  A  I G++ +    LP  C    PYK++   +C+
Sbjct:   25 ITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCA 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            ++C QV+  L PCISY   GGAV PACC G+++LN+A+KTT DR+  C C+K     I G++       P  C    PYK++   DCSK
Sbjct:   26 LSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSK 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QVT  L PC  Y   GG V PACC G+R LN A+KTT DR+T C C+K   A    ++ +  N LP  C     YK+T ++DCSK
Sbjct:   26 ISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSK 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC QV+  L PCI+Y   GGAV PACC GIR +N  ++TT DRR  CNC+K+ +  IPG++ +    LP  C    PYK++   +C+
Sbjct:    1 ITCGQVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCA 88          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.758e-17
Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC QV+  L PCI+Y   GGAV PACC GI+ +N  +KTT DR+  CNC+K  A  + G++      LP  C    PYK++   +C+
Sbjct:   25 ITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCA 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.908e-17
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC QV+  L PCI Y   GGAV PACC GIR +N  ++TT DR+  CNC+K+ +A +PG++ +    LP  C    PYK++   +C+
Sbjct:    1 ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCA 88          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 4.908e-17
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC QV+  L PCI Y   GGAV PACC GIR +N  ++TT DRRT CNC+K+ +  I G++ +    LP  C    PYK++   +C+
Sbjct:    1 ITCGQVSSSLAPCIGYVRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCA 88          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.428e-16
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC QV+  L PCI Y   GGAV PACC GIR +N  ++TT DR+  CNC+K+ +A +PG++ +    LP  C    PY+++   +C+
Sbjct:   27 ITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCA 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C QV   ++PC+SY   G     ACC G+R+LN+A+ TT DRRT CNC+K  A  I GL+      +P  C    PY ++  +DCS
Sbjct:   28 ISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 115          
The following BLAST results are available for this feature:
BLAST of CB610695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
NLTP_PRUAV3.399e-1846.59Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP_MALDO9.889e-1847.73Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP_HELAN1.292e-1744.94Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP_GERHY1.292e-1747.19Non-specific lipid-transfer protein OS=Gerbera hyb... [more]
NLTP1_PRUDO1.687e-1746.59Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP_PYRCO3.758e-1744.32Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP1_PRUPE4.908e-1745.45Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP1_PRUAR4.908e-1746.59Non-specific lipid-transfer protein 1 OS=Prunus ar... [more]
NLTP1_PRUDU1.428e-1644.32Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP2_ORYSI2.436e-1643.18Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610695 ID=CB610695; Name=CB610695; organism=Citrus sinensis; type=EST; length=494bp
GGGGAATGCATAAACCATAATTACAATGGCACAGTGTCTCTTGCAACAGT
GCTATTGTTATTGTTGGCTGCCACTACGGCTCCCCTGAATGTAGCAACAG
CAATAACATGTGAGCAAGTGACAATCTGGCTGACACCATGCATCAGCTAT
GGTGTATTAGGTGGGGCTGTTCAGCCAGCTTGTTGTGAAGGCATTAGAGC
TTTGAATGCTGCTTCAAAAACCACAGAAGATAGAAGGACCCAATGTAATT
GTGTGAAGGAAGGCGCTGCTAGGATCCCTGGACTCGACTATGATCGTGTT
AATATGCTTCCTGACATTTGTCGGAGTAAATGTCCTTATAAACTTACACA
TGATCTTGATTGCTCTAAGTGCGCCCTTAATTCTTATCCTAGCTAGCCTG
TTATTGCTTGTTCTCTTATTCATTGTTTTGAATTTTAGGCCCTTTCCGAG
CCGATCATTTACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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