CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: HS101_ORYSJ (Heat shock protein 101 OS=Oryza sativa subsp. japonica GN=HSP101 PE=2 SV=1)

HSP 1 Score: 440.269 bits (1131), Expect = 5.012e-123
Identity = 226/239 (94.56%), Postives = 231/239 (96.65%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  VRILSRRTKNNP LIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRV LDS PEEIDNLERK++ L+
Sbjct:  188 EEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLE 426          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2)

HSP 1 Score: 434.106 bits (1115), Expect = 3.592e-121
Identity = 220/239 (92.05%), Postives = 231/239 (96.65%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  VRILSRRTKNNP LIGEPGVGKTAVVEGLAQRIV+GDVP++L DVRLI+LDMGALVAGAKYRGEFEERLK+VLKEVE+AEGKVILFIDEIHLVLGAG+TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEGHHGVRIQDRAL+ AAQLSARYITGRHLPDKAIDLVDEACANVRV LDS PEEIDNLERK+M L+
Sbjct:  186 EEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLE 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.374e-96
Identity = 175/239 (73.22%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++ILSRRTKNNP LIGEPGVGKTA+ EGLAQRIV  DVP +L D +LIALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G++ILFIDEIH V+GAG T+G+MDA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+YE HHGV+I D ALV AA LSARYI+ R LPDKAIDLVDEA A +++ + S PEE+D ++RK + L+
Sbjct:  186 DEIRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVARDVPDSLRDRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSNGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEIHHGVKISDTALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDRKILQLE 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAES (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpB PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.821e-96
Identity = 171/239 (71.55%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIVR DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E+EG++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKYRGEFEERLKAVLKEVKESEGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.821e-96
Identity = 171/239 (71.55%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIVR DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E+EG++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELDLSALVAGAKYRGEFEERLKAVLKEVKESEGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 8.909e-96
Identity = 169/239 (70.71%), Postives = 204/239 (85.36%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +++LSRRTKNNP LIGEPGVGKTA+VEGLAQRIV GDVP  L D RL+ALDMGAL+AGAKYRGEFEERLKAV++EV ++EGKVILFIDE+H ++GAG  EG+MDA+N+ KP LARG+L CIGATTL EYRKY+EKDAA ERRFQQVY  EPSV DT++ILRGLKEKYE +HG+RI+D A++ AA LS RYIT R LPDKAIDL+DEA + +R+ +DS P EID +ER+ + L+
Sbjct:  187 DEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPETLKDKRLVALDMGALIAGAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERRIIQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2)

HSP 1 Score: 349.747 bits (896), Expect = 8.909e-96
Identity = 171/239 (71.55%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++ILSRRTKNNP LIGEPGVGKTA+ EGLAQRIV GDVP +L D +LI+LDMGA++AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+YE HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++ + S PEE+D ++RK + L+
Sbjct:  187 DEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDRKILQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3)

HSP 1 Score: 349.362 bits (895), Expect = 1.164e-95
Identity = 172/239 (71.97%), Postives = 205/239 (85.77%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++ILSRRTKNNP LIGEPGVGKTA+ EGLAQRI+ GDVP +L D RLIALDMGAL+AGAK+RGEFEERLKAVLKEV ++EG +ILFIDEIH V+GAG  +GSMDA NL KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQV+V +P+V DT+SILRGLKE+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++ + S PEE+D ++RK + L+
Sbjct:  187 DEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDRRLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDAGNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEIDRKILQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2)

HSP 1 Score: 348.977 bits (894), Expect = 1.520e-95
Identity = 172/239 (71.97%), Postives = 204/239 (85.36%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++ILSRRTKNNP LIGEPGVGKTA+ EGLAQRI+ GDVP +L D +LIALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G +ILFIDEIH V+GAG T+G+MDA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DT+SILRGLKE+YE HHGV+I D ALV AA LS RYI+ R LP KAIDLVDEA A +++ + S PEE+D ++RK + L+
Sbjct:  188 DEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPQSLKDRKLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLKMEITSKPEELDEVDRKVLQLE 426          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLP_TRYBB (Heat shock protein 100 OS=Trypanosoma brucei brucei GN=HSP100 PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 174/239 (72.80%), Postives = 201/239 (84.10%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +E+   +R+LSRRTKNNP LIGEPGVGKTA+ EG+AQRIVRGDVP  L + RL +LD+GAL+AG+  RGEFEERLK+VL EV+E+   VILFIDEIHLVLGAG++ GSMDAANL KPMLARG+LR IGATTLEEYR YVEKDAAFERRF  VYV EPSV + +SILRGLK++YE HHGV+I D A+VVAAQL+ RYIT R +PDKAIDL+DEACANVRV L S PE ID LERKK  L+
Sbjct:  183 DEVLRTIRVLSRRTKNNPILIGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLFSLDLGALIAGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSGGSMDAANLLKPMLARGELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYEAHHGVQITDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERKKRQLE 421          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
HS101_ORYSJ5.012e-12394.56Heat shock protein 101 OS=Oryza sativa subsp. japo... [more]
HS101_ARATH3.592e-12192.05Heat shock protein 101 OS=Arabidopsis thaliana GN=... [more]
CLPB1_THEEB1.374e-9673.22Chaperone protein clpB 1 OS=Thermosynechococcus el... [more]
CLPB_STAES6.821e-9671.55Chaperone protein clpB OS=Staphylococcus epidermid... [more]
CLPB_STAEQ6.821e-9671.55Chaperone protein clpB OS=Staphylococcus epidermid... [more]
CLPB_GEOSL8.909e-9670.71Chaperone protein clpB OS=Geobacter sulfurreducens... [more]
CLPB2_ANASP8.909e-9671.55Chaperone protein clpB 2 OS=Anabaena sp. (strain P... [more]
CLPB1_SYNE71.164e-9571.97Chaperone protein clpB 1 OS=Synechococcus elongatu... [more]
CLPB_PLEBO1.520e-9571.97Chaperone protein clpB OS=Plectonema boryanum GN=c... [more]
CLP_TRYBB3.385e-9572.80Heat shock protein 100 OS=Trypanosoma brucei bruce... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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