CB610810

Overview
NameCB610810
Unique NameCB610810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:118..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.999e-22
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 287
            MSDTCGNCDCAD++QCVKKGSSY A  +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.691e-18
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 3
Query:   99 TCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 290
            TCGNCDC D+SQCVKKG+SY    VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.691e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 284
            MSD CGNCDCAD SQCVKKG+S     VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSID--IVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.313e-17
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 284
            MS  C NCDC+D SQC KKG S+  V VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.313e-17
Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 287
            MS  C NCDCAD +QCVKKG+SY  V VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.639e-16
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 287
            MSD CGNCDCAD+SQCVKKG+SY  V VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.639e-16
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 287
            MSD CGNCDCAD+SQCVKKG+SY  V VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.617e-14
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 287
            MSD CGNCDCAD+SQCVKKG+SY  V V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CB610810 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 3
Query:   90 MSDTCGNCDCADRSQCVKKGSSYAAVFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 287
            MSD CG+CDCAD+SQCVKKG+SY  V V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CB610810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.999e-2268.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC8.691e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE8.691e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV4.313e-1760.00Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO4.313e-1760.61Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.639e-1656.06Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.639e-1656.06Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ2.617e-1451.52Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI9.944e-1450.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_E05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610810 ID=CB610810; Name=CB610810; organism=Citrus sinensis; type=EST; length=590bp
GCGGGGATCACAGATAAGCAATGCAAGTTTCGTACAATAAAGAGCCCTCT
ATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACAC
CTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAA
GCAGCTATGCTGCTGTCTTCGTCGAGACTGACTTGAGCTTTGTCAGCACC
GTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAGTG
CGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAG
CAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGT
GGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAAGAAAAATTCTCT
ACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGT
TGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATG
TAATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGTTTAGTTTTAAT
GTATTATTGTTAGTCGAAAAAAAAGAAAAAAAAAAAAAAA
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