CB610954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_ARATH (NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At4g02580 PE=1 SV=3) HSP 1 Score: 365.54 bits (937), Expect = 2.106e-102 Identity = 176/207 (85.02%), Postives = 191/207 (92.27%), Query Frame = 1 Query: 67 EIRPAIR-PSLQASRSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGGK 684 EIR R P+ Q +RS STALNYHLDSPDN PDLPW+FS+ N+ KVKEILS+YPSNYKQSAVIPLLDLAQQQ+GGWLPVSAMN VAK+IEVAPIRVYEVATFYSMFNR+KVGKYHLLVCGTTPCM+RGSR+IE ALL HLGVKR EVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNY+EDVTP++VVEIVE LR+G K Sbjct: 12 EIRQVFRQPTSQVTRSLSTALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIVEKLRKGEK 218 HSP 2 Score: 28.1054 bits (61), Expect = 2.106e-102 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 677 GEKLPPGTQNPKRI 718 GEK P GTQNPKRI Sbjct: 216 GEKPPHGTQNPKRI 229
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_CAEEL (Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Caenorhabditis elegans GN=F53F4.10 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.180e-53 Identity = 103/196 (52.55%), Postives = 138/196 (70.41%), Query Frame = 1 Query: 106 RSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGGKATA 693 R +T L H D+ +NN ++ +KF+ N+E++K I+ YP +K A+IPLLDLAQ+QHG WLP+SAM+EVAKI+EV +R YEVATFY+MFNR VGKY L VC TTPCM+RG+ I + + K LG+ E TKDGLF++ E+EC+G CVNAPMI + D +Y+ED+TPK V EI++ L+ G K A Sbjct: 21 RGGATGLMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHG-WLPISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITETIEKKLGIHAGETTKDGLFTLAEVECLGACVNAPMIQIND----------DYFEDLTPKDVNEILDDLKAGRKPAA 205
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Bos taurus GN=NDUFV2 PE=1 SV=3) HSP 1 Score: 206.838 bits (525), Expect = 9.253e-53 Identity = 97/186 (52.15%), Postives = 138/186 (74.19%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNP+ P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA+I++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+TPK + EI++ L+ G Sbjct: 37 ALFVHRDTPENNPETPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTPKDIEEIIDELKAG 211
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_RAT (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus GN=Ndufv2 PE=1 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 96/186 (51.61%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNPD P+ F+ N E+++ I+ +YP ++ +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I + L + LG+K E T D LF++ E+EC+G CVNAPM+ + D +YYED+TPK + EI++ LR G Sbjct: 36 ALFVHRDTPENNPDTPFDFTPENYERIEAIVRNYPEGHRAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------DYYEDLTPKDIEEIIDELRAG 210
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 96/186 (51.61%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAG 211
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_PANTR (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Pan troglodytes GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 96/186 (51.61%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAG 211
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Homo sapiens GN=NDUFV2 PE=1 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 96/186 (51.61%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAG 211
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_GORGO (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 96/186 (51.61%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+T K + EI++ L+ G Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTAKDIEEIIDELKAG 211
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus GN=Ndufv2 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 5.998e-52 Identity = 95/186 (51.08%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 121 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRRG 678 AL H D+P+NNPD P+ F+ N ++++ I+ +YP ++ +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I + L + LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED+TPK + EI++ L+ G Sbjct: 36 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHQAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYEDLTPKDIEEIIDELKAG 210
BLAST of CB610954 vs. ExPASy Swiss-Prot
Match: NDUV2_NEUCR (NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-24 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.383e-48 Identity = 95/204 (46.57%), Postives = 140/204 (68.63%), Query Frame = 1 Query: 70 IRPAIRPSLQAS-RSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVR--GSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLR 672 I P R L S R S L H ++PDNNPD+P+KFS N++ ++EI+ YP YK++AV+PLLDL Q+QHG + +S MNEVA+++E+ P+RVYEVA+FY+M+NR+ VGK+H+ C TTPC + GS I A+ +HLG+K+ E T DGLF+ E+EC+G C NAPM+ + D +Y+ED+TP+ + +++ L+ Sbjct: 27 IAPVSRACLSISARRPSDTLMVHRNTPDNNPDIPFKFSADNEKVIEEIIKRYPPQYKKAAVMPLLDLGQRQHG-FCSISVMNEVARLLEMPPMRVYEVASFYTMYNRTPVGKFHVQACTTTPCQLGGCGSDVIVKAIKEHLGIKQGETTPDGLFTFIEVECLGACANAPMVQIND----------DYFEDLTPETIKQVLSALK 219 The following BLAST results are available for this feature:
BLAST of CB610954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610954 ID=CB610954; Name=CB610954; organism=Citrus sinensis; type=EST; length=718bpback to top |