CB610956

Overview
NameCB610956
Unique NameCB610956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:103..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.012e-23
Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 2
Query:   23 MATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 307
            MA LGG R+V    N+ EI +LARFAV+E+NKKQN+ L+F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    1 MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 9.987e-23
Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 2
Query:   23 MATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 322
            MA +GGV +V A  N+ E+ +LARFAVDE+NKK+N+ L+F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF P + + + T+
Sbjct:   34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.763e-19
Identity = 51/92 (55.43%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   32 LGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 307
            LGGV  V    N+  +V+LARFAV E+NKK NS L+F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF PV  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19
Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 2
Query:   14 QKTMATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 289
            +KTM  LGGV ++    N+ EI +LARFA+ E+NK+QN  L+F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   30 EKTMM-LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.699e-19
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 2
Query:   32 LGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSST 319
            LGG  +  + AN+ E   LARFAVDE+NK++N+ L+F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   48 LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.325e-18
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2
Query:   35 GGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSS 316
            GG+++V A  N+ ++  LARFAV+E+N+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF PV +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.676e-17
Identity = 44/75 (58.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query:   74 EIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 298
            EI  LARFAVDE+NKKQN+ L+F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF PV
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYTM_SOLTU (Multicystatin OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.054e-16
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   26 ATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 289
            A LGG+ NV    NN E  +LARFAV +YNKK+N++L+F            G LY ITL A++ G+KK++EAK+W K W  FK++ EF
Sbjct:  474 AKLGGIINVPFP-NNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAKIWVKEWENFKKVIEF 560          

HSP 2 Score: 81.2629 bits (199), Expect = 4.494e-15
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:    5 RLXQKTMATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA*LV 331
            +L    +A LGG+ +V    NN E  +LARFA+  YNKK+N +L+F            G +Y ITL A++ G+KK++E K+W K W  FK++ EF  V    + T  ++
Sbjct:  184 KLVGDDIAKLGGITDVPFP-NNPEFQDLARFAIQVYNKKENVHLEFVENLNVKQQVVAGMMYYITLAAIDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSAKTGGII 291          

HSP 3 Score: 78.9518 bits (193), Expect = 2.230e-14
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 2
Query:   26 ATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA*LVV 334
            A +GG  +V    NN E  +LARFAV +YNKK+N++L++            G +Y ITL A + G+KK++EAK+W K W  FK++ EF  V    +    +++
Sbjct:  568 AIIGGFTDVPFP-NNPEFQDLARFAVQDYNKKENAHLEYVENLNVKEQLVAGMIYYITLVATDAGKKKIYEAKIWVKEWEDFKKVVEFKLVGDDSAKPGGIII 669          

HSP 4 Score: 73.559 bits (179), Expect = 9.370e-13
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 2
Query:   35 GGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAV-EGGQKKLFEAKVWEKPWMQFKELKEFNPV 298
            GG+ NV    NN +   LARFA+ +YNKKQN++L+F            G +Y ITL A  + G+KK+++AK+W K W  FK++ EF  V
Sbjct:   99 GGIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKKVVEFKLV 186          

HSP 5 Score: 73.1738 bits (178), Expect = 1.224e-12
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 2
Query:   32 LGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 298
            LGG   V    N+ E  +L RFAV +YNK QN++L+F            G LY IT  A +GG+KK++E K+W K W  FK++ EF  V
Sbjct:  382 LGGFTEVPFP-NSPEFQDLTRFAVHQYNKDQNAHLEFVENLNVKKQVVAGMLYYITFAATDGGKKKIYETKIWVKVWENFKKVVEFKLV 469          

HSP 6 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 2
Query:   26 ATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 298
            A  GG+ NV    N+ E  +LARFAV +YN  QN++L+F            G +Y ITL A + G KK +EAK+W K W  FK++ +F  V
Sbjct:  285 AKTGGIINVP-NPNSPEFQDLARFAVQDYNNTQNAHLEFVENLNVKEQLVSGMMYYITLAATDAGNKKEYEAKIWVKEWEDFKKVIDFKLV 374          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 43/91 (47.25%), Postives = 55/91 (60.44%), Query Frame = 2
Query:   32 LGGVRNVEATANNQ-EIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVA 301
            LGGV++  A   N  E + LARFAV E+N K N+ L+F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF P A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of CB610956 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 2
Query:   14 QKTMATLGGVRNVEATANNQEIVNLARFAVDEYNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 292
            Q+    +GGVR+++A AN+ ++ +LARFAVDE+NK +N  L++            GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:    4 QQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
The following BLAST results are available for this feature:
BLAST of CB610956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN2.012e-2356.84Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH9.987e-2351.00Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT1_ORYSJ1.763e-1955.43Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT3_ARATH3.927e-1952.17Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT12_ORYSJ6.699e-1946.88Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT1_MAIZE3.325e-1845.74Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN3.676e-1758.67Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYTM_SOLTU9.054e-1647.73Multicystatin OS=Solanum tuberosum PE=2 SV=1[more]
CYT1_HORVU1.183e-1547.25Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT1_ARATH3.441e-1539.78Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IIIaF_C06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIIaF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610956 ID=CB610956; Name=CB610956; organism=Citrus sinensis; type=EST; length=622bp
GGGGAGACTTANGCAGAAAACAATGGCTACATTGGGCGGTGTTCGTAACG
TTGAAGCAACAGCCAACAATCAGGAGATCGTTAATCTCGCACGCTTCGCT
GTGGATGAGTATAACAAGAAGCAGAATTCAAATCTGCAATTTGTAAAAGT
TGTAAGTGCGAAGCAGCAAGTGGTTTCAGGGACTCTGTACGACATCACCT
TGGAGGCTGTTGAAGGAGGTCAGAAGAAACTTTTTGAAGCTAAGGTCTGG
GAGAAGCCTTGGATGCAATTCAAGGAGTTGAAAGAATTCAATCCTGTTGC
TCAGTCTCACTCCTCAACCGCTTAGCTTGTGGTGACTGAAGATGACATCT
GTAGCTTGCAATGGATCAAACAAAGAGACAGTATCAATAAGAATGGAGCT
ATAACCATGTTCAGATTATAAAAATAAATGTAACCGGACTTATGAGTTTG
GTTCTTTAATCTTTTGCAAGTTATGTGTCGATTATTTATGGTAGTAGCTG
CAACTCAGCGCAACTTTTATAACTGTGTGAAAAATAATTGAAATGACCTT
TGGTGTTTAATATATATACAAGATTAATCTCTTTCTACCTGCGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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