CB610968

Overview
NameCB610968
Unique NameCB610968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB610968_ssr1 microsatellite CB610968_ssr1:1..12. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7037 contig Csv1_Contig7037:407..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_MALDO (Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 2.973e-58
Identity = 110/148 (74.32%), Postives = 118/148 (79.73%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINFG 446
            +GGKILTGGSVIES+GNFVQPTIVEI+  A +VKEELF PVLYVMKF+T EEA+ +NNSVPQGLSSSIFT  P  IFKW+ PHGSD GIVNVNIPTNGAEI                 SDSWKQYMRRSTCTINYG ELPLAQGINFG
Sbjct:  361 QGGKILTGGSVIESDGNFVQPTIVEIASNASVVKEELFGPVLYVMKFKTLEEAIALNNSVPQGLSSSIFTSKPNTIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGTELPLAQGINFG 508          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7B4_ARATH (Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 1.130e-57
Identity = 109/148 (73.65%), Postives = 120/148 (81.08%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINFG 446
            +GGKILTGG  +E EGNFV+PTI+EIS  A +VKEELFAPVLYV+KF++F EAV INNSVPQGLSSSIFTR+PENIF+W+ P GSD GIVNVNIPTNGAEI                 SDSWKQYMRRSTCTINYGNELPLAQGINFG
Sbjct:  361 QGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSVPQGLSSSIFTRNPENIFRWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELPLAQGINFG 508          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_PEA (Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 2.783e-56
Identity = 108/148 (72.97%), Postives = 118/148 (79.73%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINFG 446
            +GGKI+TGGSV+ESEGNFV PTIVEIS  A +VKEELFAPVLYVMKF+  EEA+ +NNSVPQGLSSSIFT+ P  IFKW+ P GSD GIVNVNIPTNGAEI                 SDSWKQYMRRSTCTINYG+ELPLAQGINFG
Sbjct:  361 QGGKIVTGGSVLESEGNFVVPTIVEISADAAVVKEELFAPVLYVMKFKDLEEAIALNNSVPQGLSSSIFTQKPSTIFKWIGPSGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 508          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_BRANA (Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 3.084e-47
Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRST 392
            +GGK+LTGG  +E EGNFV+PTI+EIS  A +VKEELFAPVLY +KF+TFEEAV INNSVPQGLSSSIFTRSP+NIFKW+ P GSD GIVNVNIPTNGAEI                 SDSWKQYMRRST
Sbjct:  364 QGGKVLTGGKAVEGEGNFVEPTIIEISSDAAVVKEELFAPVLYALKFKTFEEAVAINNSVPQGLSSSIFTRSPDNIFKWIGPMGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 493          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_CAEEL (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.069e-43
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 3
Query:    6 GGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINF 443
            GGKI  GG V+E +GNFV PTIV  +   + +V  E FAP+LYV+KF T EEA+ INN V QGLSSS+FT + +N+FKW+ P GSD GIVNVNIPT+GAEI                 SDSW+QYMRRSTCTINY  ELPLAQGI F
Sbjct:  384 GGKIEYGGKVLERDGNFVLPTIVTGLKHDSPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSLFTTNIQNVFKWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWRQYMRRSTCTINYSKELPLAQGIKF 530          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_DICDI (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 6.019e-43
Identity = 86/148 (58.11%), Postives = 105/148 (70.95%), Query Frame = 3
Query:    3 EGGKILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINF 443
            +GGK++ GG+ ++ S GNFV+PT+V I   A IVK ELF P+LY+MKF+  ++A   NN VPQGLSSS+FT + +NIFKWL P GSD GIVNVN+ TNGAEI                 SDSWKQY RRST TINYGN +PL+QGINF
Sbjct:  361 QGGKVVIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILYIMKFKNLDDAFAWNNEVPQGLSSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAEIGGAFGGEKETGGGRESGSDSWKQYCRRSTNTINYGNTMPLSQGINF 508          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_MOUSE (Alpha-aminoadipic semialdehyde dehydrogenase OS=Mus musculus GN=Aldh7a1 PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 4.769e-40
Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINF 443
            +GG ++ GG V++  GN+V+PTIV  ++  A IV +E FAP+LYV KFQ  EE  + NN V QGLSSSIFT+    IF+WL P GSD GIVNVNIPT+GAEI                 SD+WKQYMRRSTCTINY   LPLAQGI F
Sbjct:  363 QGGTVVYGGKVMDHPGNYVEPTIVTGLAHDAPIVHQETFAPILYVFKFQDEEEVFEWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSTSLPLAQGIKF 510          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_BOVIN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Bos taurus GN=ALDH7A1 PE=2 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 1.812e-39
Identity = 83/148 (56.08%), Postives = 98/148 (66.22%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINF 443
            EGG ++ GG V++  GN+V+PTIV  +   A IV  E FAP+LYV KF+  +E    NN V QGLSSSIFT+    IF+WL P GSD GIVNVNIPT+GAEI                 SD+WKQYMRRSTCTINY  +LPLAQGI F
Sbjct:  363 EGGTVVYGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLSSSIFTKDMGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSKDLPLAQGIKF 510          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_HUMAN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=4)

HSP 1 Score: 160.999 bits (406), Expect = 3.091e-39
Identity = 83/148 (56.08%), Postives = 97/148 (65.54%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINF 443
            EGG ++ GG V++  GN+V+PTIV  +   A I   E FAP+LYV KF+  EE    NN V QGLSSSIFT+    IF+WL P GSD GIVNVNIPT+GAEI                 SD+WKQYMRRSTCTINY  +LPLAQGI F
Sbjct:  363 EGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSKDLPLAQGIKF 510          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL7A1_RAT (Alpha-aminoadipic semialdehyde dehydrogenase (Fragment) OS=Rattus norvegicus GN=Aldh7a1 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.534e-38
Identity = 83/148 (56.08%), Postives = 98/148 (66.22%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRSTCTINYGNELPLAQGINF 443
            EGG ++ GG V++  GN+V+PTIV  +   A IV +E FAP+LYV KF+  EE  + NN V Q LSSSIFT+    IF+WL P GSD GIVNVNIPT+GAEI                 SD+WKQYMRRSTCTINY   LPLAQGI F
Sbjct:   80 EGGTVVYGGKVMDHPGNYVEPTIVTGLVHDAPIVHKETFAPILYVFKFKNEEEVFEWNNKVKQELSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGSGRESGSDAWKQYMRRSTCTINYSTALPLAQGIKF 227          
The following BLAST results are available for this feature:
BLAST of CB610968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AL7A1_MALDO2.973e-5874.32Aldehyde dehydrogenase family 7 member A1 OS=Malus... [more]
AL7B4_ARATH1.130e-5773.65Aldehyde dehydrogenase family 7 member B4 OS=Arabi... [more]
AL7A1_PEA2.783e-5672.97Aldehyde dehydrogenase family 7 member A1 OS=Pisum... [more]
AL7A1_BRANA3.084e-4770.77Aldehyde dehydrogenase family 7 member A1 OS=Brass... [more]
AL7A1_CAEEL2.069e-4359.86Putative aldehyde dehydrogenase family 7 member A1... [more]
AL7A1_DICDI6.019e-4358.11Putative aldehyde dehydrogenase family 7 member A1... [more]
AL7A1_MOUSE4.769e-4056.76Alpha-aminoadipic semialdehyde dehydrogenase OS=Mu... [more]
AL7A1_BOVIN1.812e-3956.08Alpha-aminoadipic semialdehyde dehydrogenase OS=Bo... [more]
AL7A1_HUMAN3.091e-3956.08Alpha-aminoadipic semialdehyde dehydrogenase OS=Ho... [more]
AL7A1_RAT1.534e-3856.08Alpha-aminoadipic semialdehyde dehydrogenase (Frag... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_G11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610968 ID=CB610968; Name=CB610968; organism=Citrus sinensis; type=EST; length=524bp
GGGAGGGAGGGAAGATCCTTACAGGTGGTTCTGTTATAGAGTCTGAGGGG
AACTTTGTGCAGCCCACAATAGTTGAGATTAGTCCAACAGCTGACATTGT
TAAAGAAGAGTTGTTTGCTCCTGTCCTTTATGTTATGAAATTTCAGACCT
TCGAAGAAGCAGTTAAGATCAATAATTCAGTACCCCAGGGATTGAGTAGT
TCTATTTTCACCCGCAGTCCTGAAAATATTTTCAAGTGGCTAAGGCCACA
TGGAAGTGACACTGGTATTGTGAATGTAAATATACCTACAAATGGGGCTG
AAATTGGTGGTGCTTTTGGTGGTGAAAAGGCTACAGGGGGAGGCCGTGAA
GCAGGAAGTGATTCTTGGAAGCAATACATGCGACGCTCGACTTGCACAAT
CAACTATGGAAATGAATTGCCTCTGGCCCAAGGAATCAATTTCGGCTAAG
TGGAGCACATTTTGGTCAAGTATGTTAACATATTCTGGTTTGACTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
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