CB610971

Overview
NameCB610971
Unique NameCB610971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: SPX2_MOUSE (Sugar phosphate exchanger 2 OS=Mus musculus GN=Slc37a2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.721e-25
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = 3
Query:   90 PGILLIRKIRGKDWSLTTYRYIILLITFIAYACYHASRKPSSIVKSVL---CPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAKGWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            PG+  +R      W    +R  ILL+TF+ YACYH SRKP SIVKS L   C + ++       P+ +          D N +T   W PF+       LG +D AFL  Y++GMF++G  G+ L LR +L+ GMV SG+F  LFG+GYF +IH   ++++
Sbjct:    7 PGVWFLRAFSRDSW----FRGFILLLTFLIYACYHMSRKPISIVKSRLHQNCSEMVR-------PVNDTH--------DLNDTTWCSWSPFDKDDYKELLGAVDNAFLVAYAIGMFISGIFGERLPLRYYLSAGMVLSGLFTSLFGLGYFWNIHMLWYFVL 148          
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: SPX2_HUMAN (Sugar phosphate exchanger 2 OS=Homo sapiens GN=SLC37A2 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.259e-23
Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 3
Query:   90 PGILLIRKIRGKDWSLTTYRYIILLITFIAYACYHASRKPSSIVKSVL---CPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAKGWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            PG+   R      W    +R +ILL+TF+ YACYH SRKP SIVKS L   C + +K       PI +            N +    W PF+  +    LG +D AFL  Y++GMF++G  G+ L LR +L+ GM+ SG+F  LFG+GYF +IH   ++++
Sbjct:    7 PGVWFFRAFSRDSW----FRGLILLLTFLIYACYHMSRKPISIVKSRLHQNCSEQIK-------PINDTH--------SLNDTMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFGLGYFWNIHELWYFVV 148          
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: SPX2_BOVIN (Sugar phosphate exchanger 2 OS=Bos taurus GN=SLC37A2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.664e-23
Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 3
Query:  144 YRYIILLITFIAYACYHASRKPSSIVKSVL---CPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAKGWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            YR  ILLITF+ Y CYH SRKP S+VKS L   C + ++       P+              N +T   W PF+ ++    LG +D AFL  Y++GMF++G  G+ L LR +LT GM+ SG+F  LFG+GYF +IH   ++++
Sbjct:   11 YRAFILLITFLIYTCYHMSRKPISVVKSRLHHNCSEVIQ-------PVNSTH--------SLNDTTWCNWAPFDKSNYKELLGAVDNAFLVAYAIGMFISGIFGERLPLRYYLTAGMLLSGLFTSLFGLGYFWNIHVLWYFVL 138          
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: GLPT_HUMAN (Glycerol-3-phosphate transporter OS=Homo sapiens GN=SLC37A1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.250e-23
Identity = 65/170 (38.24%), Postives = 89/170 (52.35%), Query Frame = 3
Query:   87 PPGILLIRKIRGKDWSLTTYRYIILLITFIAYACYHASRKPSSIVKSVLCPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAK-----------GWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            P GI  I       W    YR  I ++TF+ YA +H SRKP SIVK  L         K      E  VR  F   +R   +A            GW PF+  +    LG +D +FL  Y+VGM+++G +G+ L +R +LT GM+ SG F  LFG+GYF +IH+FGFY++
Sbjct:    5 PAGIRFIISFSRDQW----YRAFIFILTFLLYASFHLSRKPISIVKGEL--------HKYCTAWDEADVR--FSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLGYFYNIHSFGFYVV 160          
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: SPX2_XENLA (Sugar phosphate exchanger 2 OS=Xenopus laevis GN=slc37a2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.011e-21
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  144 YRYIILLITFIAYACYHASRKPSSIVKSVLCPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAKGWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            YR  I+++TF+ Y CYH SRKP SIVK  L  +    P                  +  N +T   W PF  T+    LG +D AFL  Y++GMF +G  G+ L LR +L+ GM+ SGIF    G GY+ +IHA  +Y++
Sbjct:   21 YRGFIIVMTFLFYTCYHLSRKPISIVKGQLHRNCSALPNPP--------------NISENDTTWCSWAPFENTNYKELLGSLDTAFLVSYAIGMFFSGIFGERLPLRYYLSGGMIISGIFTSFMGFGYYWNIHALWYYIL 146          
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: SPX2_DANRE (Sugar phosphate exchanger 2 OS=Danio rerio GN=slc37a2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.626e-21
Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 3
Query:   75 VRQTPPGILLIRKIRGKDWSLTTYRYIILLITFIAYACYHASRKPSSIVKSVL---CPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAKGWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            ++   PGI LI       W    YR+ IL +TF+ Y  YH SRKP SIVKS L   C +                V    + +  N  T   W PF+G +  +  G +D  FL  Y+VGMF +G  G+ L LR +L+TGM+ SG+F  LFG+G++  IH+  +Y +
Sbjct:    1 MKSLAPGIKLITSFSRDSW----YRFSILFLTFVFYTSYHLSRKPISIVKSQLHRNCSN---------------VVHPANLNITDN-DTWCDWVPFDGKNYQNLFGVLDNCFLVAYAVGMFFSGIFGERLPLRYYLSTGMLLSGLFTALFGLGFYWQIHSLWYYCL 146          
BLAST of CB610971 vs. ExPASy Swiss-Prot
Match: SPX2_XENTR (Sugar phosphate exchanger 2 OS=Xenopus tropicalis GN=slc37a2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.702e-20
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  144 YRYIILLITFIAYACYHASRKPSSIVKSVLCPDPLKGPKKKPWPIGEFFVRQEFVGLDRNVSTAKGWDPFNGTHGTSKLGEIDLAFLACYSVGMFVAGHLGDTLDLRLFLTTGMVGSGIFVGLFGMGYFLDIHAFGFYLI 563
            YR  I+++TF+ Y CYH SRKP SIVK  L  +    P                  +  N +T   W PF  ++    LG +D AFL  Y++GMF +G  G+ L LR +L+ GM+  GIF    G+GY+ +IHA  +Y++
Sbjct:   21 YRGFIIVMTFLFYTCYHMSRKPISIVKGQLHRNCSALPSPP--------------NISANDTTWCSWAPFENSNYKELLGSLDTAFLVSYAIGMFFSGIFGERLPLRYYLSGGMIICGIFTSFMGLGYYWNIHALWYYIL 146          
The following BLAST results are available for this feature:
BLAST of CB610971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SPX2_MOUSE8.721e-2539.13Sugar phosphate exchanger 2 OS=Mus musculus GN=Slc... [more]
SPX2_HUMAN1.259e-2338.51Sugar phosphate exchanger 2 OS=Homo sapiens GN=SLC... [more]
SPX2_BOVIN3.664e-2340.56Sugar phosphate exchanger 2 OS=Bos taurus GN=SLC37... [more]
GLPT_HUMAN6.250e-2338.24Glycerol-3-phosphate transporter OS=Homo sapiens G... [more]
SPX2_XENLA2.011e-2138.57Sugar phosphate exchanger 2 OS=Xenopus laevis GN=s... [more]
SPX2_DANRE2.626e-2136.75Sugar phosphate exchanger 2 OS=Danio rerio GN=slc3... [more]
SPX2_XENTR1.702e-2037.14Sugar phosphate exchanger 2 OS=Xenopus tropicalis ... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_H04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610971 ID=CB610971; Name=CB610971; organism=Citrus sinensis; type=EST; length=565bp
TTTTTTTTTTTTGGGGTAGTTTATTGGTTAATGTTTGTATGATTATTACA
TAGATGGCGGGGAATTCTGATACGGTGAGGCAAACCCCTCCTGGGATTTT
GCTTATAAGAAAAATTAGAGGCAAAGATTGGAGCCTAACGACATATAGAT
ACATAATTTTGTTGATTACTTTCATTGCATATGCTTGTTACCACGCCTCG
AGAAAGCCTTCTAGCATTGTCAAGAGTGTATTATGCCCAGACCCGCTTAA
GGGACCCAAGAAGAAGCCTTGGCCTATTGGTGAATTCTTTGTCAGGCAAG
AATTTGTGGGTCTTGATCGAAATGTATCCACAGCTAAGGGTTGGGATCCA
TTCAATGGAACTCATGGGACATCAAAATTGGGTGAAATAGATCTTGCCTT
TCTTGCTTGTTACTCCGTAGGAATGTTTGTTGCTGGGCATTTAGGTGATA
CTTTGGATTTGAGGTTGTTTTTGACTACAGGTATGGTAGGGAGTGGCATT
TTTGTGGGGTTATTTGGCATGGGATACTTTTTAGATATTCATGCGTTCGG
TTTCTATCTTATTAT
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