CF417088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417088 vs. ExPASy Swiss-Prot
Match: ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 62/168 (36.90%), Postives = 95/168 (56.55%), Query Frame = 3 Query: 3 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIPRPKIFQSPXXXXXXXXXXXXXXXXKSEKLDIPKTLSSKFAGIGN----DLSEKDVRTDIDAIKEDKRVLELSLTEVRTENSRFREK 494 NW+IVGGGDN +G E++VLNM+ LAWS++ SV+GR PLASEGLS+ + GE LVAFGGYNG+YNNE+ +++ + + K ++P +SE +++ + + + N E + I IK +K LE SL + R + + R++ Sbjct: 408 NWFIVGGGDNKSGASESVVLNMSTLAWSVVASVQGRVPLASEGLSLVVSSYNGEDVLVAFGGYNGRYNNEINLLKPSHKSTLQTKTLEAPLPGSLSAVNNATTRDIESE-VEVSQEGRVREIVMDNVNPGSKVEGNSERIIATIKSEKEELEASLNKERMQTLQLRQE 574 HSP 2 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 400 SELILMLSKRIKECWNCHLRKSGQRILGLEKXIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESLQTIENEVQILRRQKSA 681 SE I+ K KE L K + L L + + E +++L KEL SV+GQL AE+SRCFKLE +AEL++ L++L+T++ E+++L+RQK+A Sbjct: 543 SERIIATIKSEKEELEASLNKERMQTLQLRQELGEAELRNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTLETLQKELELLQRQKAA 636
BLAST of CF417088 vs. ExPASy Swiss-Prot
Match: ACBP5_ARATH (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=ACBP5 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 3 NWYIVGGGDNNNGCQETIVLNMTKLAWSILTSVKGRNPLASEGLSVCSAIIEGEHHLVAFGGYNGKYNNEVFVMRLKPRDIPRPKI 260 NWYIVGGGDN +G +T+VLNM+ LAWS++TSV+ PLASEGLS+ + GE +VAFGGYNG YNNEV V++ + + KI Sbjct: 409 NWYIVGGGDNKSGASKTVVLNMSTLAWSVVTSVQEHVPLASEGLSLVVSSYNGEDIVVAFGGYNGHYNNEVNVLKPSHKSSLKSKI 494 HSP 2 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 36/93 (38.71%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 400 SELILMLSKRIKECWNCHLRKSGQRILGLEKXIDEVNSTHSELSKELSSVQGQLVAERSRCFKLEAQIAELQKMLESLQTIENEVQILRRQKS 678 ++ I+ K KE L K + L L++ + E+++ ++EL KEL SV+ QL AE+SRCFKLE ++AEL++ L++++T++ E+++L+RQ++ Sbjct: 525 ADRIITTLKSEKEEVEASLNKEKIQTLQLKEELAEIDTRNTELYKELQSVRNQLAAEQSRCFKLEVEVAELRQKLQTMETLQKELELLQRQRA 617 The following BLAST results are available for this feature:
BLAST of CF417088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417088 ID=CF417088; Name=CF417088; organism=Citrus sinensis; type=EST; length=684bpback to top |