CF417092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417092 vs. ExPASy Swiss-Prot
Match: DLD1_KLULA (D-lactate dehydrogenase [cytochrome], mitochondrial OS=Kluyveromyces lactis GN=DLD1 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.843e-33 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 12 FPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGK---NLPELPTLMFEFIG-TQAYSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWA 314 FPT+ DAA + + +GIQ++ +ELLD+ ++ +N + N E PTL F+ G ++ E V+KI S+HN T F FA D ++K ELW+ RK ALW+ Sbjct: 331 FPTVSDAASCSSHLIQAGIQLNAMELLDDNMMKIINQSGATSKDNWVESPTLFFKIGGRSEQIIQEVIKEVEKIASQHNNTKFEFATDEDSKLELWEARKVALWS 435 HSP 2 Score: 53.1434 bits (126), Expect = 5.843e-33 Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 1 Query: 355 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFHTVXTI*SEQRR 504 DV VP+S A++I+ +K+E++AS L+ +++ HAGDGNFH +EQR+ Sbjct: 453 DVAVPISKFADVINATKEEMNASGLLTSLVGHAGDGNFHAFIIYNTEQRK 502 HSP 3 Score: 42.3578 bits (98), Expect = 5.843e-33 Identity = 18/36 (50.00%), Postives = 24/36 (66.67%), Query Frame = 2 Query: 503 EDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGENE 610 E R+ AE + MV A+ EGTCTGEHG+G G+ + Sbjct: 499 EQRKTAETIVENMVKRAIDAEGTCTGEHGVGIGKRD 534 HSP 4 Score: 31.5722 bits (70), Expect = 5.843e-33 Identity = 13/30 (43.33%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 591 LGQGKMKYLEKELGTGALETMKRIKVALDP 680 +G GK YL +E+G + M+++K+ALDP Sbjct: 528 VGIGKRDYLLEEVGEDTVAVMRKLKLALDP 557
BLAST of CF417092 vs. ExPASy Swiss-Prot
Match: DLD1_YEAST (D-lactate dehydrogenase [cytochrome] 1, mitochondrial OS=Saccharomyces cerevisiae GN=DLD1 PE=1 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 8.813e-27 Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 9 NFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGK---NLPELPTLMFEFIGTQAYSHEQTLI--VQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPS 335 +F TIKDAA A SGI ++ +ELLDE ++ +N + + E PT+ F+ IG ++ + L+ V+ + ++ F FA+D + K ELW+ RK ALW+ + S Sbjct: 337 SFDTIKDAAACASNLTQSGIHLNAMELLDENMMKLINASESTDRCDWVEKPTMFFK-IGGRSPNIVNALVDEVKAVAQLNHCNSFQFAKDDDEKLELWEARKVALWSVLDADKS 449 HSP 2 Score: 46.595 bits (109), Expect = 8.813e-27 Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 1 Query: 355 DVCVPLSCLAELISRSKKELDASPLICTVIAHAGDGNFH 471 DV VP+S ++I +KK++ AS LI ++ HAGDGNFH Sbjct: 460 DVAVPVSQFDKVIHETKKDMQASKLINAIVGHAGDGNFH 498 HSP 3 Score: 41.2022 bits (95), Expect = 8.813e-27 Identity = 18/36 (50.00%), Postives = 24/36 (66.67%), Query Frame = 2 Query: 503 EDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGENE 610 E+ + +L MV AL+ EGTCTGEHG+G G+ E Sbjct: 507 EEHETCSQLVDRMVKRALNAEGTCTGEHGVGIGKRE 542 HSP 4 Score: 34.2686 bits (77), Expect = 8.813e-27 Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 591 LGQGKMKYLEKELGTGALETMKRIKVALDP 680 +G GK +YL +ELG ++ M++IK+A+DP Sbjct: 536 VGIGKREYLLEELGEAPVDLMRKIKLAIDP 565
BLAST of CF417092 vs. ExPASy Swiss-Prot
Match: LDHD_MOUSE (Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus GN=Ldhd PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 66/237 (27.85%), Postives = 116/237 (48.95%), Query Frame = 3 Query: 3 TCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGKNLPELPTLMFEFIGTQAYSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISG-CMCSSFLPG-RVDIKVKERA*CITTDLHCNCSCR*W*LSHGDXYLI---------RAKKRTARKQNG*IDSWSILPCRWKEHVLVSMVLGQGKMKYLEKELGTGALETMKRIKVALDP 680 TC FP+++ A D + + + + V+R+E LD+V + A N + N P PTL EF G+Q EQ + I ++ G+ F +A++ E + ELW R A +A A+ P +A + C+ S LP V+ K + +A +T + + + G+ + I ++ A +N + ++ EH +G GK + L++E+G +ETM+++K LDP Sbjct: 250 TCAFPSVQAAVDSTVQILQAAVPVARIEFLDDVMMDACNRHSKLNCPVAPTLFLEFHGSQQTLAEQLQRTEAITQDNGGSHFSWAKEAEKRNELWAARHNAWYAALALSPGSKAYSTDVCVPISRLPEILVETKEEIKASKLTGAIVGH-------VGDGNFHCILLVDPDDAEEQRRVKAFAENLGRRALALGGTCTGEH-----GIGLGKRQLLQEEVGPVGVETMRQLKNTLDP 474
BLAST of CF417092 vs. ExPASy Swiss-Prot
Match: LDHD_HUMAN (Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens GN=LDHD PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 63/233 (27.04%), Postives = 114/233 (48.93%), Query Frame = 3 Query: 3 TCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGKNLPELPTLMFEFIGTQAYSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISG-CMCSSFLPGRVDIKVKE--RA*CITTDLHCNCSCR*W*LSHGDXYLIRAKKRTARKQNG*IDSWSILPCRWKEHVLVSMV----LGQGKMKYLEKELGTGALETMKRIKVALDP 680 TC FP+++ A D + + + + V+R+E LDEV + A N + N PTL EF G+Q EQ ++IV ++ +DF +A++ E + LW R A +A A P + + C+ S LP + ++ KE A +T + + + G+ + I ++ G + +++ R + + +G GK + L++E+G +ETM+++K LDP Sbjct: 273 TCAFPSVQAAVDSTVHILQAAVPVARIEFLDEVMMDACNRYSKLNCLVAPTLFLEFHGSQQALEEQLQRTEEIVQQNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGYSTDVCVPISRLP-EIVVQTKEDLNASGLTGSIVGH-------VGDGNFHCILLVNPDDAEELGRVKAFAEQLGRRALALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDP 497 The following BLAST results are available for this feature:
BLAST of CF417092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417092 ID=CF417092; Name=CF417092; organism=Citrus sinensis; type=EST; length=687bpback to top |