CF417122

Overview
NameCF417122
Unique NameCF417122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3770 contig Csv1_Contig3770:234..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 8.994e-57
Identity = 126/226 (55.75%), Postives = 156/226 (69.03%), Query Frame = 2
Query:    8 VNLKNKNSSPPSTPRFH--ELRVSDSVSSEISC------FESVVSCSETVKSTAMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVF-LAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            +++K   S+P     F   E+RVS+SV +EIS       F S +SC   V +T  E+++ F+P I SGS ADI  R +M+DEHI IDDLSAHLGS +    PSAFY VFDGHGGPEAA+++KEN  +LFF+DA  P+   I D F L ELENSH+K           E  VS +CGTTALTAL++GR+LLVANAGDCRAVLC +GVAVDMS DHR +Y PERRR+E
Sbjct:   16 LDVKCHISAPKDQKNFQIDEVRVSESVRAEISGSAETPRFGSGMSC---VTTTIGESASDFIPTIRSGSFADIRSRETMEDEHICIDDLSAHLGS-YNFSVPSAFYGVFDGHGGPEAAIFMKENLTRLFFQDAVFPEMPSIVDAFFLEELENSHRKAFALADLAMADETIVSGSCGTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIE 237          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.446e-55
Identity = 110/209 (52.63%), Postives = 145/209 (69.38%), Query Frame = 2
Query:   32 SPPSTPRFHELRVSDSVSSEISCFESVVSCSETVKSTAMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            SP S+P+    + + SVS  ++   S V      +     +   ++P I SGS ADIGP+ +M+DEHIRIDDLS+ +GSLF+ P PSAFYAVFDGHGGPEAA YV+ENA++ FF+D   PQTS+++ V++ E+E S +            + S+S +CGTTALTAL+ GR L+VANAGDCRAVLC KG A+DMS+DH+P  L ERRRVE
Sbjct:   31 SPVSSPKLGFTQSTASVSGSLTT--SPVQADIFPEGDCDPSVLDYIPTIRSGSFADIGPKRNMEDEHIRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQADLALAEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVE 237          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.708e-53
Identity = 123/228 (53.95%), Postives = 147/228 (64.47%), Query Frame = 2
Query:    2 IDVNLKNKNSSPPSTPRFHELRVSDSV------SSEISCFESVVSCSETVKSTAMETSAVFVPIICSGSCADIGP-RISMDDEHIRIDDLSAHLGSLF-KCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDIND-VFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            IDV      +  PS  +  E+R+ DS+      S E    ES+ SCS T   T  E    FVP I SGS AD G  R  M+DEHI IDDLS HLGS F + P P AFY VFDGHGG +A+ Y+KENAM LFF+DA   Q+  + D +FL ELE SH++           ER VSS+CGTTALTALV+GR+L+VAN GDCRAVLC KG AVDMS DH+ ++ PERRRVE
Sbjct:   55 IDVKSHLSVAKDPSNFQIAEIRIHDSICIDIPSSEETPLLESIKSCSAT---TIEEHVTEFVPNISSGSYADKGDYREYMEDEHICIDDLSDHLGSSFYRFPVPMAFYGVFDGHGGSDASQYIKENAMSLFFEDAVFRQSPSVVDSLFLKELETSHREAYRLADLAMEDERIVSSSCGTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVE 279          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.243e-50
Identity = 96/164 (58.54%), Postives = 120/164 (73.17%), Query Frame = 2
Query:  164 FVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRV 655
            FVP I SGS ADIGPR  M+DEHIRIDDLSAHLGSL  CP PSAFY VFDGHGG +AA Y+K +AM+  F+D++ PQ S +++ ++  +ENS ++           +  +S + GTTALTALV GR LLVANAGDCRAVLC +GVA++MS+DHR +Y  E  RV
Sbjct:   71 FVPSIRSGSFADIGPRRYMEDEHIRIDDLSAHLGSLLVCPLPSAFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQADLALADDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERV 234          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.099e-49
Identity = 98/184 (53.26%), Postives = 125/184 (67.93%), Query Frame = 2
Query:  104 ESVVSCSETVKSTAMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRV 655
            E+ +   E +    +E S  F P I SGS ADIGPR  M+DEHIRIDDLS HLGSL  CP P+AFY VFDGHGGP+AA Y+K +A++LFF+D++ PQ  + ++ F   +E S              + ++S + GTTAL AL+ GR LLVANAGDCRAVLC KGVAV+MS+DHRP+Y  E  R+
Sbjct:   45 EAAIEVPELMVKAPVE-SLQFSPNIRSGSFADIGPRRYMEDEHIRIDDLSGHLGSLLMCPAPNAFYGVFDGHGGPDAAAYMKRHAIRLFFEDSEFPQALEEDESFYESVEKSIHNAFLSADLALADDLAISRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERI 227          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.183e-32
Identity = 73/196 (37.24%), Postives = 116/196 (59.18%), Query Frame = 2
Query:   71 SDSVSSEISCFESVVSCSETVKSTAMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            S +   +++    V  C+  +KS  ++  + F+P+  SGSCA+ G +  M+DEHI IDDL  HLG+  +C +  AFY VFDGHGG +AA +V++N ++   +D+  P            ++ + K            + S+  + GTTALTA + GR L++ANAGDCRAVL  +G A+++S+DH+P+   E+ R+E
Sbjct:   50 SSATRLQLAANADVDVCNLVMKS--LDDKSEFLPVYRSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLC----------VKKAIKSAFLKADYEFADDSSLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIE 233          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.221e-30
Identity = 78/187 (41.71%), Postives = 108/187 (57.75%), Query Frame = 2
Query:  101 FESVVSCSETVKSTAMET-SAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            FE    C  TV     +  S+ FVP+I SG  +DIG R  M+D H+ I DL+ + G         +FY VFDGHGG +AA YV++N  ++  +DAD P   +        +  S  +           + ++SS  GTTALTA++ GR+LLVANAGDCRAVL  +G A++MS+DHR   L ER+R+E
Sbjct:   27 FEMEKVCENTVSLDFKQARSSSFVPVIRSGDWSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELE------KVVRRSFVQTDSQFAERCSHQNALSS--GTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIE 205          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28
Identity = 76/181 (41.99%), Postives = 102/181 (56.35%), Query Frame = 2
Query:  122 SETVKSTAMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTC--GTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            S T K+     +  ++P++ SG  ADIG R +M+D  I  D+L    G       PSAFY VFDGHGG  AA +V  N  +   +D D P+          E+E +                SV+S+   GTTAL ALV+GR+LLVANAGDCRAVLC +G A++MS+DH+PS   E+ R+E
Sbjct:   48 SGTEKTFENMDAVAYMPVVRSGGWADIGSRHTMEDVFICSDNLMKEFGVESFEDGPSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPR----------EIEKALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIE 218          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.015e-28
Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 2
Query:  155 SAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            ++ F P+  SGS +D GP+ SM+DE I +DDL+ ++GS     +  AFY VFDGHGG +AA + K+N MKL  +D   P TS       A ++  H               S+  + GTTALTAL+L + +L+ANAGD RAVL  +G A+++S+DH+P+   ER R+E
Sbjct:   64 NSTFQPVFRSGSWSDKGPKQSMEDEFICVDDLTEYIGS-----STGAFYGVFDGHGGVDAASFTKKNIMKLVMEDKHFP-TSTKKATRSAFVKTDHA---------LADASSLDRSSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIE 216          
BLAST of CF417122 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27
Identity = 80/214 (37.38%), Postives = 107/214 (50.00%), Query Frame = 2
Query:   17 KNKNSSPPSTPRFHELRVSDSVSSEISCFESVVSCSETVKSTAMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCXKGVAVDMSQDHRPSYLPERRRVE 658
            K+K+ SP   P     RV ++                T        S  FVP I SG  +DIG R  M+D H+ I DL+ + G         +FY VFDGHGG +AA +V++N  ++  +DAD P           ELE   ++               + + GTTALTA++ GR LL+ANAGDCRAVL   G A++MS DHRP  L E+ RVE
Sbjct:   26 KSKSKSPDELPSPRMERVCENT---------------TAADFKQNKSGNFVPNIRSGDWSDIGGRQYMEDTHVCITDLAKNFGYQSVDNEAISFYGVFDGHGGKDAAHFVRDNLPRIIVEDADFP----------LELEKVVRRSFVHADNQFA---KTTLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVE 211          
The following BLAST results are available for this feature:
BLAST of CF417122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
P2C13_ARATH8.994e-5755.75Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
P2C49_ARATH6.446e-5552.63Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C43_ARATH2.708e-5353.95Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C47_ORYSJ6.243e-5058.54Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C02_ORYSJ3.099e-4953.26Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C27_ARATH1.183e-3237.24Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C27_ORYSJ3.221e-3041.71Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C57_ORYSJ1.768e-2841.99Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C47_ARATH3.015e-2842.26Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C54_ORYSJ1.146e-2737.38Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-052 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_F1 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417122 ID=CF417122; Name=CF417122; organism=Citrus sinensis; type=EST; length=659bp
GATCGATGTTAATCTCAAGAACAAGAATAGTAGCCCTCCTTCAACTCCAA
GATTCCATGAACTTCGTGTTTCTGACTCAGTTTCCTCTGAAATCTCCTGT
TTTGAATCGGTTGTCAGTTGTTCAGAGACCGTTAAAAGTACTGCTATGGA
GACTTCGGCAGTGTTTGTCCCAATCATTTGTTCTGGCAGCTGTGCTGACA
TTGGACCAAGGATCTCCATGGATGATGAGCACATTCGGATTGATGATCTA
TCTGCCCACCTTGGATCTCTCTTTAAGTGTCCTACTCCAAGTGCTTTCTA
TGCAGTGTTTGATGGTCATGGTGGACCTGAGGCAGCTGTTTATGTCAAGG
AGAATGCTATGAAATTATTTTTTAAGGATGCTGATATGCCCCAAACATCT
GATATCAATGATGTCTTCTTAGCAGAGTTGGAGAATTCTCATAAGAAAGC
ATTTTTACTGGCAGACCTTGCCTTGGCTGATGAACGTAGTGTTAGTAGTA
CGTGTGGAACAACTGCTCTGACTGCCTTAGTGCTTGGAAGGAATTTACTG
GTTGCAAATGCTGGTGACTGCCGAGCAGTTCTCTGTANAAAAGGAGTTGC
AGTTGATATGTCTCAAGATCATAGGCCTTCCTATCTGCCCGAGCGGAGGC
GAGTTGAGG
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