CF417134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 2.149e-45 Identity = 86/127 (67.72%), Postives = 98/127 (77.17%), Query Frame = 1 Query: 85 MGIELHSVKVISGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV----KSSAFNFL 453 MG L S+K ISGGW A + CD CK+ AAVFCRVDSAFLC+ CD RIH+ +H RVW+CEVCEQAPAAVTCKADAAALCV+CD DIHSANPLA RHER+P+E FFDSA++ V SS F L Sbjct: 1 MGFGLESIKSISGGWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS-FTRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGIL 126
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 4.638e-40 Identity = 76/112 (67.86%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 133 VAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFD--SADSIVKSSAFNFL 453 +A K CD+CK+A AA++CR D+AFLCL+CD ++H ++HARVWMCEVCEQAPA VTCKADAAALCVTCD DIHSANPLARRHER+P+ PF+D S+D VK +A NFL Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFL 112
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.633e-35 Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 148 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIVK-SSAFNFL 453 CD+CK+ AA +FCR D+AFLC +CD +IH ++H RVW+CEVCEQAPA VTCKADAAALCVTCD DIHSANPL+RRHER+PI PF+D+ SS+ NF+ Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFV 113
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.387e-28 Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 1 Query: 115 ISGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 402 + W+ A CDTC++AA V+CR DSA+LC +CD ++H ++H RV +C+ CE+APAA CKADAA+LC TCD++IHSANPLARRH+R+PI P Sbjct: 4 VESNWAQA---CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILP 99
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 9.072e-28 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 118 SGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 402 SG W+ A CDTC++AA V+C DSA+LC CD R+H ++H RV +C+ CE APAA CKADAA+LC CD +IHSANPLARRH+R+PI P Sbjct: 9 SGTWARA---CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILP 103
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.547e-27 Identity = 51/99 (51.52%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 115 ISGGWSVAVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEP 402 I G + +PCDTC++ A V+C DSA+LC++CD ++H+ ++H RV +CE CE+APAA C+AD A+LC CD+++HSANPLARRH+R+PI P Sbjct: 9 IGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILP 107
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.738e-14 Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 145 PCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 405 PCD C A +FCR D+A LCL CD ++H KH R +C+ C P +V C D LC CD D+H + ++ H R +E F Sbjct: 8 PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 9.738e-14 Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 136 AVKPCDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 405 +V C+ C A +FCR D+A LCL CD +H+ KH R +C+ C + P +V C D LC CD D+H + + HER +E F Sbjct: 8 SVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.312e-13 Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 148 CDTCKAAAAAVFCRVDSAFLCLNCDLRIH---NCMNKHARVWMCEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPF 405 CD C ++ A V+C+ DSA LCL CD ++H KH R +C+ C ++P+++ C+ + + LC CD H+A+ + H R P E F Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
BLAST of CF417134 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.343e-12 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 1 Query: 148 CDTCKAAAAAVFCRVDSAFLCLNCDLRIHNC---MNKHARVWM------------CEVCEQAPAAVTCKADAAALCVTCDNDIHSANPLARRHERLPIEPFFDSADSIV 429 CD C A+VFC D A LC CD ++H+ +KH R + C++C+ A + C+ D A LC CD+ IH+AN ++H+R + SA S V Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSV 113 The following BLAST results are available for this feature:
BLAST of CF417134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417134 ID=CF417134; Name=CF417134; organism=Citrus sinensis; type=EST; length=465bpback to top |